Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.22□□□□□ -2.37
SSNA1O43805 RNU7-138P-201ENST00000459479 64 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 RNU6-1037P-201ENST00000459571 107 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.22□□□□□ -2.37
SSNA1O43805 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
SSNA1O43805 SNORD11B-201ENST00000607707 90 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 U2.17-201ENST00000611454 95 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 AC010608.3-201ENST00000625048 527 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 MIR6767-201ENST00000637302 66 ntBASIC0.22□□□□□ -2.37
SSNA1O43805 AC005592.1-201ENST00000566527 1640 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 MIR103A2-201ENST00000362154 78 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 RNA5SP347-201ENST00000362445 119 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 RNU6-1067P-201ENST00000384752 107 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 MIR526A1-201ENST00000384897 85 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 MIR450B-201ENST00000401182 78 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 MIR320B2-201ENST00000408479 138 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.21□□□□□ -2.38
SSNA1O43805 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.21□□□□□ -2.38
SSNA1O43805 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
SSNA1O43805 MIR3682-201ENST00000581338 84 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.21□□□□□ -2.38
SSNA1O43805 RNU6-94P-201ENST00000607728 107 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 AC122133.1-201ENST00000613964 233 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 AC007014.2-201ENST00000615581 479 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 SEPT14P17-201ENST00000617978 177 ntBASIC0.21□□□□□ -2.38
SSNA1O43805 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.21□□□□□ -2.38
SSNA1O43805 SNORD87-201ENST00000364849 89 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.2□□□□□ -2.38
SSNA1O43805 MTCYBP10-201ENST00000424905 650 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.2□□□□□ -2.38
SSNA1O43805 AC092628.1-201ENST00000436250 252 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 AC010095.1-201ENST00000443543 144 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 MTND1P5-201ENST00000517906 940 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 MIR4438-201ENST00000585271 93 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 FAM106DP-201ENST00000586416 501 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 AC137590.2-201ENST00000619709 240 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 MIR6079-201ENST00000635807 62 ntBASIC0.2□□□□□ -2.38
SSNA1O43805 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
SSNA1O43805 RNU6-1266P-201ENST00000362794 105 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 Y_RNA.100-201ENST00000363141 102 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 MIR1185-2-201ENST00000408687 86 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.19□□□□□ -2.38
SSNA1O43805 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.19□□□□□ -2.38
SSNA1O43805 MRPS18CP6-201ENST00000423587 223 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.19□□□□□ -2.38
SSNA1O43805 AC098934.3-201ENST00000430450 190 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 MTCO1P19-201ENST00000443487 500 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 AP000870.1-201ENST00000472927 406 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 RNU6-430P-201ENST00000517078 107 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 RNU6-58P-201ENST00000517143 103 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 AP000889.1-201ENST00000530968 660 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 AL137161.1-201ENST00000532231 390 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 CYP3A137P-201ENST00000562436 69 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 FGF7P1-201ENST00000582820 288 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 AC092354.1-201ENST00000606057 376 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
SSNA1O43805 MIR5087-201ENST00000635826 76 ntBASIC0.19□□□□□ -2.38
SSNA1O43805 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SSNA1O43805 Y_RNA.111-201ENST00000363248 100 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 RNU6-137P-201ENST00000363680 108 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 RNU6-1317P-201ENST00000364582 104 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 RNU2-29P-201ENST00000410423 189 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.18□□□□□ -2.38
SSNA1O43805 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.18□□□□□ -2.38
SSNA1O43805 AP003716.2-201ENST00000528260 108 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 AK6P2-201ENST00000549020 471 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 HIF1AP1-201ENST00000553642 175 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 7SK.7-201ENST00000603504 247 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 AC064836.2-201ENST00000609491 462 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 AC017083.3-201ENST00000609955 700 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 AL353997.5-201ENST00000618886 171 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 OR5AK4P-201ENST00000635912 903 ntBASIC0.18□□□□□ -2.38
SSNA1O43805 MIRLET7C-201ENST00000362160 84 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 SNORA25.3-201ENST00000363205 127 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 MIR620-201ENST00000385232 95 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 MIR140-201ENST00000385282 100 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 MIR1185-1-201ENST00000408598 86 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 MRPS10P1-201ENST00000448483 130 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 SNRPFP3-201ENST00000457792 225 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 AC067940.1-201ENST00000458411 300 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 U8.21-201ENST00000459536 136 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 HMGN1P7-201ENST00000491722 313 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 RNU2-56P-201ENST00000516826 190 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 AP003461.1-201ENST00000528866 78 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 AC023157.2-201ENST00000540596 141 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 AC016727.1-205ENST00000605437 569 ntBASIC0.17□□□□□ -2.38
SSNA1O43805 RNU6-282P-201ENST00000365357 103 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 RNU6-1297P-201ENST00000384415 104 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 RNU6-456P-201ENST00000384493 107 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SSNA1O43805 MTCO2P8-201ENST00000412213 658 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.16□□□□□ -2.38
SSNA1O43805 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.16□□□□□ -2.38
SSNA1O43805 AC093019.1-201ENST00000443135 252 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.16□□□□□ -2.38
SSNA1O43805 AC091133.4-201ENST00000511142 308 ntBASIC0.16□□□□□ -2.38
SSNA1O43805 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms