Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
SGCEO43556 U6.73-201ENST00000619194 103 ntBASIC0.5□□□□□ -2.33
SGCEO43556 AP000568.1-201ENST00000282964 442 ntBASIC0.49□□□□□ -2.33
SGCEO43556 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
SGCEO43556 U3.8-201ENST00000363675 217 ntBASIC0.49□□□□□ -2.33
SGCEO43556 SNORD73A-201ENST00000386062 65 ntBASIC0.49□□□□□ -2.33
SGCEO43556 SNORA12.1-201ENST00000390873 148 ntBASIC0.49□□□□□ -2.33
SGCEO43556 MIR548J-201ENST00000408833 112 ntBASIC0.49□□□□□ -2.33
SGCEO43556 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.49□□□□□ -2.33
SGCEO43556 AC133104.1-201ENST00000429100 218 ntBASIC0.49□□□□□ -2.33
SGCEO43556 MTND3P9-201ENST00000429526 346 ntBASIC0.49□□□□□ -2.33
SGCEO43556 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.49□□□□□ -2.33
SGCEO43556 CETN4P-201ENST00000432407 469 ntBASIC0.49□□□□□ -2.33
SGCEO43556 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.49□□□□□ -2.33
SGCEO43556 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.49□□□□□ -2.33
SGCEO43556 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.49□□□□□ -2.33
SGCEO43556 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
SGCEO43556 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
SGCEO43556 AC090616.2-202ENST00000584248 222 ntBASIC0.49□□□□□ -2.33
SGCEO43556 AC139792.3-201ENST00000623525 224 ntBASIC0.49□□□□□ -2.33
SGCEO43556 SCARNA4-201ENST00000629045 128 ntBASIC0.49□□□□□ -2.33
SGCEO43556 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SGCEO43556 RNU6-517P-201ENST00000384362 110 ntBASIC0.48□□□□□ -2.33
SGCEO43556 SNORD116-13-201ENST00000384408 92 ntBASIC0.48□□□□□ -2.33
SGCEO43556 MIR499A-201ENST00000384903 122 ntBASIC0.48□□□□□ -2.33
SGCEO43556 RNU6-903P-201ENST00000391270 109 ntBASIC0.48□□□□□ -2.33
SGCEO43556 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.48□□□□□ -2.33
SGCEO43556 MTCO2P34-201ENST00000421994 607 ntBASIC0.48□□□□□ -2.33
SGCEO43556 RNU7-128P-201ENST00000517247 62 ntBASIC0.48□□□□□ -2.33
SGCEO43556 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.48□□□□□ -2.33
SGCEO43556 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.48□□□□□ -2.33
SGCEO43556 PRELID3BP2-201ENST00000605362 201 ntBASIC0.48□□□□□ -2.33
SGCEO43556 RNU6-1266P-201ENST00000362794 105 ntBASIC0.47□□□□□ -2.33
SGCEO43556 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.47□□□□□ -2.33
SGCEO43556 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.47□□□□□ -2.33
SGCEO43556 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AL356010.1-201ENST00000456364 102 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AC113410.1-201ENST00000505029 247 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.47□□□□□ -2.33
SGCEO43556 SNORA70.12-201ENST00000516084 153 ntBASIC0.47□□□□□ -2.33
SGCEO43556 RNU6-917P-201ENST00000516294 104 ntBASIC0.47□□□□□ -2.33
SGCEO43556 RNU1-117P-201ENST00000517041 158 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SGCEO43556 AP003484.1-201ENST00000530974 250 ntBASIC0.47□□□□□ -2.33
SGCEO43556 SUB1P2-201ENST00000556401 297 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AC025627.3-201ENST00000582078 182 ntBASIC0.47□□□□□ -2.33
SGCEO43556 MIR151B-201ENST00000584249 96 ntBASIC0.47□□□□□ -2.33
SGCEO43556 SNORD11B-201ENST00000607707 90 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AC087683.2-201ENST00000611384 326 ntBASIC0.47□□□□□ -2.33
SGCEO43556 AC023934.1-201ENST00000574529 2389 ntBASIC0.47□□□□□ -2.33
SGCEO43556 RNU6-181P-201ENST00000363225 107 ntBASIC0.46□□□□□ -2.34
SGCEO43556 Y_RNA.123-201ENST00000363338 102 ntBASIC0.46□□□□□ -2.34
SGCEO43556 RNU6-282P-201ENST00000365357 103 ntBASIC0.46□□□□□ -2.34
SGCEO43556 Y_RNA.560-201ENST00000384689 102 ntBASIC0.46□□□□□ -2.34
SGCEO43556 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.46□□□□□ -2.34
SGCEO43556 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
SGCEO43556 STAG3L5P-204ENST00000443759 179 ntBASIC0.46□□□□□ -2.34
SGCEO43556 MTCO2P7-201ENST00000446518 666 ntBASIC0.46□□□□□ -2.34
SGCEO43556 LINC01399-202ENST00000458450 244 ntBASIC0.46□□□□□ -2.34
SGCEO43556 SNORD42A-201ENST00000459584 64 ntBASIC0.46□□□□□ -2.34
SGCEO43556 AL049830.1-201ENST00000468034 425 ntBASIC0.46□□□□□ -2.34
SGCEO43556 AC098869.1-201ENST00000481627 292 ntBASIC0.46□□□□□ -2.34
SGCEO43556 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
SGCEO43556 AC022493.2-201ENST00000506122 481 ntBASIC0.46□□□□□ -2.34
SGCEO43556 SNORA18.6-201ENST00000516792 115 ntBASIC0.46□□□□□ -2.34
SGCEO43556 RNU6-445P-201ENST00000516949 107 ntBASIC0.46□□□□□ -2.34
SGCEO43556 RNA5SP54-201ENST00000516951 92 ntBASIC0.46□□□□□ -2.34
SGCEO43556 AP002001.1-203ENST00000534002 267 ntBASIC0.46□□□□□ -2.34
SGCEO43556 MRPS36P4-201ENST00000534436 298 ntBASIC0.46□□□□□ -2.34
SGCEO43556 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.46□□□□□ -2.34
SGCEO43556 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
SGCEO43556 MTND1P15-201ENST00000579262 949 ntBASIC0.46□□□□□ -2.34
SGCEO43556 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
SGCEO43556 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.46□□□□□ -2.34
SGCEO43556 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.46□□□□□ -2.34
SGCEO43556 ZNF204P-201ENST00000416749 2397 ntBASIC0.46□□□□□ -2.34
SGCEO43556 RNU6-245P-201ENST00000384020 107 ntBASIC0.45□□□□□ -2.34
SGCEO43556 AL031577.2-201ENST00000404133 280 ntBASIC0.45□□□□□ -2.34
SGCEO43556 BX295541.1-201ENST00000417774 250 ntBASIC0.45□□□□□ -2.34
SGCEO43556 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.45□□□□□ -2.34
SGCEO43556 AL445305.1-201ENST00000432577 575 ntBASIC0.45□□□□□ -2.34
SGCEO43556 NDUFB4P10-201ENST00000452541 359 ntBASIC0.45□□□□□ -2.34
SGCEO43556 AC245047.8-201ENST00000456455 284 ntBASIC0.45□□□□□ -2.34
SGCEO43556 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.45□□□□□ -2.34
SGCEO43556 SCARNA1-201ENST00000517138 166 ntBASIC0.45□□□□□ -2.34
SGCEO43556 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SGCEO43556 RMST_3.1-201ENST00000611651 109 ntBASIC0.45□□□□□ -2.34
SGCEO43556 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
SGCEO43556 ELL2P3-201ENST00000457883 1602 ntBASIC0.45□□□□□ -2.34
SGCEO43556 Y_RNA.224-201ENST00000364308 111 ntBASIC0.44□□□□□ -2.34
SGCEO43556 RNU6-424P-201ENST00000384367 105 ntBASIC0.44□□□□□ -2.34
SGCEO43556 RNU6-163P-201ENST00000384396 106 ntBASIC0.44□□□□□ -2.34
SGCEO43556 SNORA75.2-201ENST00000391138 150 ntBASIC0.44□□□□□ -2.34
SGCEO43556 SNORA75.3-201ENST00000391231 150 ntBASIC0.44□□□□□ -2.34
SGCEO43556 RNU2-9P-201ENST00000410194 145 ntBASIC0.44□□□□□ -2.34
SGCEO43556 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.44□□□□□ -2.34
SGCEO43556 MTND4P32-201ENST00000437189 1237 ntBASIC0.44□□□□□ -2.34
SGCEO43556 SNORA14.1-201ENST00000516113 141 ntBASIC0.44□□□□□ -2.34
SGCEO43556 RNU7-28P-201ENST00000516759 62 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms