Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HOXA3O43365 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.71□□□□□ -1.97
HOXA3O43365 AC103988.1-201ENST00000566382 2177 ntBASIC2.71□□□□□ -1.97
HOXA3O43365 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXA3O43365 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
HOXA3O43365 Y_RNA.7-201ENST00000362352 102 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 Y_RNA.170-201ENST00000363746 110 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 SNORD31B-201ENST00000364977 69 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 Y_RNA.310-201ENST00000365063 113 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 SNORA72.4-201ENST00000384174 132 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 Y_RNA.456-201ENST00000384232 111 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 SNORA48.5-201ENST00000391143 135 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 MTCO2P33-201ENST00000402100 465 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 RNU6-394P-201ENST00000410735 107 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXA3O43365 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA3O43365 AC074290.1-201ENST00000448883 135 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 AC114982.1-201ENST00000469402 321 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 RPL27AP5-201ENST00000469428 449 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA3O43365 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXA3O43365 PHBP14-201ENST00000512887 367 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 Y_RNA.703-201ENST00000516846 111 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXA3O43365 AC018630.3-201ENST00000542637 96 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXA3O43365 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HOXA3O43365 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXA3O43365 AC069294.1-201ENST00000608397 350 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 AC104465.1-201ENST00000611365 139 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
HOXA3O43365 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.71□□□□□ -1.98
HOXA3O43365 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HOXA3O43365 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXA3O43365 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXA3O43365 AC058791.1-201ENST00000608412 3198 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
HOXA3O43365 Y_RNA.238-201ENST00000364441 102 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 AP002088.1-201ENST00000382740 395 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 RNU6-804P-201ENST00000384286 107 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 RNU6-975P-201ENST00000384296 105 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HOXA3O43365 AL355796.1-201ENST00000406706 323 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 RNU2-2P-201ENST00000410396 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 RNU6-1135P-201ENST00000411083 103 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 AC016717.1-201ENST00000448918 286 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXA3O43365 RNU6-965P-201ENST00000516721 96 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 NDUFB9P3-201ENST00000521269 501 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 MIR3144-201ENST00000579460 79 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 AC105245.1-201ENST00000581934 244 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 RNU2-4P-201ENST00000606190 192 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 AC025754.2-201ENST00000606491 432 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.15-201ENST00000611544 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.16-201ENST00000613119 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.12-201ENST00000613778 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.9-201ENST00000615427 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.11-201ENST00000616345 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.2-201ENST00000616535 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.3-201ENST00000617785 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.19-201ENST00000618602 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 RNU2-1-201ENST00000618664 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.6-201ENST00000619225 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.5-201ENST00000619465 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 MIR5739-201ENST00000619803 80 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 U2.10-201ENST00000620268 191 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 snoZ196.1-201ENST00000625269 89 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA3O43365 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXA3O43365 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA3O43365 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
HOXA3O43365 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HOXA3O43365 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
HOXA3O43365 Z82209.1-201ENST00000422141 2135 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 AL365361.1-201ENST00000566942 3481 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXA3O43365 AC068700.1-201ENST00000565862 3754 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA3O43365 RNA5SP374-201ENST00000362939 125 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 RNU6-899P-201ENST00000363947 107 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 Y_RNA.441-201ENST00000384123 112 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 SNORA20B-201ENST00000384220 132 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 RPS20P10-201ENST00000451209 253 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 SNORD65B-201ENST00000459126 73 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 RNU6-221P-201ENST00000459541 99 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 RN7SL442P-201ENST00000473804 320 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXA3O43365 RNU6-948P-201ENST00000516374 107 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 AC100767.1-201ENST00000528178 123 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 AC021269.2-201ENST00000532318 330 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 AC026333.2-201ENST00000542164 106 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 AL162274.2-201ENST00000614406 332 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 MIR1248-201ENST00000629190 106 ntBASIC2.69□□□□□ -1.98
HOXA3O43365 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HOXA3O43365 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA3O43365 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HOXA3O43365 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms