Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC137590.2-201ENST00000619709 240 ntBASIC0.92□□□□□ -2.26
LSM1O15116 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.92□□□□□ -2.26
LSM1O15116 AL513423.1-201ENST00000621695 132 ntBASIC0.92□□□□□ -2.26
LSM1O15116 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
LSM1O15116 RNU6-392P-201ENST00000364926 101 ntBASIC0.91□□□□□ -2.26
LSM1O15116 RNU6-245P-201ENST00000384020 107 ntBASIC0.91□□□□□ -2.26
LSM1O15116 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
LSM1O15116 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LSM1O15116 Y_RNA.595-201ENST00000410403 105 ntBASIC0.91□□□□□ -2.26
LSM1O15116 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM1O15116 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.91□□□□□ -2.26
LSM1O15116 MTCO2P16-201ENST00000436962 677 ntBASIC0.91□□□□□ -2.26
LSM1O15116 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.91□□□□□ -2.26
LSM1O15116 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM1O15116 AC091133.4-201ENST00000511142 308 ntBASIC0.91□□□□□ -2.26
LSM1O15116 MTND1P35-201ENST00000526739 508 ntBASIC0.91□□□□□ -2.26
LSM1O15116 AK6P2-201ENST00000549020 471 ntBASIC0.91□□□□□ -2.26
LSM1O15116 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.91□□□□□ -2.26
LSM1O15116 AP001330.5-201ENST00000607176 411 ntBASIC0.91□□□□□ -2.26
LSM1O15116 AL357078.3-201ENST00000607528 618 ntBASIC0.91□□□□□ -2.26
LSM1O15116 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.91□□□□□ -2.26
LSM1O15116 OR4G1P-203ENST00000641984 1631 ntBASIC0.9□□□□□ -2.26
LSM1O15116 ZNF204P-201ENST00000416749 2397 ntBASIC0.9□□□□□ -2.27
LSM1O15116 Y_RNA.1-201ENST00000352915 104 ntBASIC0.9□□□□□ -2.27
LSM1O15116 RNU6-53P-201ENST00000365367 106 ntBASIC0.9□□□□□ -2.27
LSM1O15116 RNU6-440P-201ENST00000390882 105 ntBASIC0.9□□□□□ -2.27
LSM1O15116 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.9□□□□□ -2.27
LSM1O15116 Z82205.1-201ENST00000428456 297 ntBASIC0.9□□□□□ -2.27
LSM1O15116 RNU6-1208P-201ENST00000459588 107 ntBASIC0.9□□□□□ -2.27
LSM1O15116 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.9□□□□□ -2.27
LSM1O15116 AC108729.3-201ENST00000513484 108 ntBASIC0.9□□□□□ -2.27
LSM1O15116 SNORA19.2-201ENST00000516013 114 ntBASIC0.9□□□□□ -2.27
LSM1O15116 Y_RNA.717-201ENST00000517106 92 ntBASIC0.9□□□□□ -2.27
LSM1O15116 SNORA70.22-201ENST00000517160 124 ntBASIC0.9□□□□□ -2.27
LSM1O15116 AC145350.1-201ENST00000567426 208 ntBASIC0.9□□□□□ -2.27
LSM1O15116 AC080078.3-201ENST00000605407 463 ntBASIC0.9□□□□□ -2.27
LSM1O15116 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
LSM1O15116 U6.73-201ENST00000619194 103 ntBASIC0.9□□□□□ -2.27
LSM1O15116 RNU4-79P-201ENST00000362764 141 ntBASIC0.89□□□□□ -2.27
LSM1O15116 SNORD50.1-201ENST00000362987 71 ntBASIC0.89□□□□□ -2.27
LSM1O15116 RNU1-36P-201ENST00000365130 165 ntBASIC0.89□□□□□ -2.27
LSM1O15116 MIR514A2-201ENST00000385131 88 ntBASIC0.89□□□□□ -2.27
LSM1O15116 MIR514A3-201ENST00000385132 88 ntBASIC0.89□□□□□ -2.27
LSM1O15116 MIR653-201ENST00000385279 96 ntBASIC0.89□□□□□ -2.27
LSM1O15116 SNORD12-201ENST00000391002 90 ntBASIC0.89□□□□□ -2.27
LSM1O15116 MRPL42P3-201ENST00000401492 326 ntBASIC0.89□□□□□ -2.27
LSM1O15116 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AC092447.3-201ENST00000426027 686 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AC079354.2-201ENST00000453523 154 ntBASIC0.89□□□□□ -2.27
LSM1O15116 MTCO1P29-201ENST00000496868 288 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AC091885.1-201ENST00000506658 268 ntBASIC0.89□□□□□ -2.27
LSM1O15116 SNORA31.2-201ENST00000516019 134 ntBASIC0.89□□□□□ -2.27
LSM1O15116 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
LSM1O15116 SCARNA16.2-201ENST00000516520 172 ntBASIC0.89□□□□□ -2.27
LSM1O15116 RNA5SP54-201ENST00000516951 92 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.89□□□□□ -2.27
LSM1O15116 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.89□□□□□ -2.27
LSM1O15116 AC008088.1-201ENST00000580993 280 ntBASIC0.89□□□□□ -2.27
LSM1O15116 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
LSM1O15116 SNORD11B-201ENST00000607707 90 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AL133215.3-201ENST00000609801 448 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AC068792.1-201ENST00000621354 417 ntBASIC0.89□□□□□ -2.27
LSM1O15116 AC091895.1-201ENST00000624494 256 ntBASIC0.89□□□□□ -2.27
LSM1O15116 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
LSM1O15116 AC121333.1-201ENST00000567488 2709 ntBASIC0.88□□□□□ -2.27
LSM1O15116 MIR660-201ENST00000385235 97 ntBASIC0.88□□□□□ -2.27
LSM1O15116 SNORD41-201ENST00000386967 70 ntBASIC0.88□□□□□ -2.27
LSM1O15116 MIR320B2-201ENST00000408479 138 ntBASIC0.88□□□□□ -2.27
LSM1O15116 MIR1185-2-201ENST00000408687 86 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM1O15116 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.88□□□□□ -2.27
LSM1O15116 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM1O15116 AC245047.3-201ENST00000429428 127 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC083798.1-201ENST00000472671 131 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC048334.1-201ENST00000477975 159 ntBASIC0.88□□□□□ -2.27
LSM1O15116 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.88□□□□□ -2.27
LSM1O15116 AC104383.1-201ENST00000530297 370 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.88□□□□□ -2.27
LSM1O15116 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC022432.1-201ENST00000595739 310 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC092807.2-201ENST00000609367 243 ntBASIC0.88□□□□□ -2.27
LSM1O15116 AC007684.1-201ENST00000609671 477 ntBASIC0.88□□□□□ -2.27
LSM1O15116 HSBP1P2-201ENST00000299671 229 ntBASIC0.87□□□□□ -2.27
LSM1O15116 Y_RNA.363-201ENST00000365529 113 ntBASIC0.87□□□□□ -2.27
LSM1O15116 AC114482.1-201ENST00000418010 247 ntBASIC0.87□□□□□ -2.27
LSM1O15116 MTND2P9-201ENST00000422293 931 ntBASIC0.87□□□□□ -2.27
LSM1O15116 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM1O15116 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM1O15116 RPS4XP11-201ENST00000446897 772 ntBASIC0.87□□□□□ -2.27
LSM1O15116 TRMT112P2-201ENST00000512910 132 ntBASIC0.87□□□□□ -2.27
LSM1O15116 SNORA31.4-201ENST00000516049 129 ntBASIC0.87□□□□□ -2.27
LSM1O15116 RNU7-99P-201ENST00000516271 62 ntBASIC0.87□□□□□ -2.27
LSM1O15116 Y_RNA.695-201ENST00000516715 107 ntBASIC0.87□□□□□ -2.27
LSM1O15116 RNA5SP454-201ENST00000517231 127 ntBASIC0.87□□□□□ -2.27
LSM1O15116 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM1O15116 FRG2DP-202ENST00000566967 323 ntBASIC0.87□□□□□ -2.27
LSM1O15116 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
LSM1O15116 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.87□□□□□ -2.27
LSM1O15116 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
LSM1O15116 AL158063.1-201ENST00000615349 536 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms