Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORD116-28-201ENST00000516123 91 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 AL590705.4-201ENST00000532209 134 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 MRPS36P4-201ENST00000534436 298 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM38O00635 AC023824.2-201ENST00000566185 400 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 AC011476.5-201ENST00000615594 130 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 AL365265.1-201ENST00000621045 234 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 IGHVIII-44-202ENST00000636235 289 ntBASIC2.81□□□□□ -1.96
TRIM38O00635 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
TRIM38O00635 Y_RNA.122-201ENST00000363331 96 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 RNU6-740P-201ENST00000364734 105 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 RNY4P28-201ENST00000365281 93 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 RNU6-81P-201ENST00000365608 104 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 Y_RNA.405-201ENST00000383979 100 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 Y_RNA.451-201ENST00000384200 100 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 Y_RNA.524-201ENST00000384564 100 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 Y_RNA.561-201ENST00000384694 100 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 SNORA12.2-201ENST00000391040 156 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 RNU2-52P-201ENST00000410680 190 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 RNU6-651P-201ENST00000411040 105 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 SNORD109B-201ENST00000458961 67 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 SNORD109A-201ENST00000459128 67 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 AC090525.1-201ENST00000479116 478 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.8□□□□□ -1.96
TRIM38O00635 SNORA48.11-201ENST00000517015 89 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 Z83818.1-201ENST00000603584 150 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 AC011921.3-201ENST00000605540 361 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 AC240442.1-201ENST00000616055 283 ntBASIC2.8□□□□□ -1.96
TRIM38O00635 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM38O00635 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
TRIM38O00635 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM38O00635 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM38O00635 RNU6-290P-201ENST00000365212 101 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 Y_RNA.383-201ENST00000383855 97 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RNU6-968P-201ENST00000384076 107 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RNU6-804P-201ENST00000384286 107 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RNU6-1081P-201ENST00000384537 107 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 MTCYBP2-201ENST00000407745 171 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RPL19P1-201ENST00000411635 428 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM38O00635 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM38O00635 RNU7-87P-201ENST00000459343 62 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RNU6-1012P-201ENST00000516606 109 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RPPH1-2P-201ENST00000516688 293 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM38O00635 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM38O00635 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 AL138963.2-201ENST00000605137 226 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 U4atac.1-201ENST00000618345 95 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM38O00635 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
TRIM38O00635 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM38O00635 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRIM38O00635 Y_RNA.44-201ENST00000362676 108 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 SNORD50B-201ENST00000364995 70 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 SNORD50.2-201ENST00000365465 70 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM38O00635 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.78□□□□□ -1.96
TRIM38O00635 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM38O00635 AL161788.1-201ENST00000441805 169 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 NDUFB4P10-201ENST00000452541 359 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM38O00635 RN7SKP210-201ENST00000459176 261 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM38O00635 SEPT14P8-201ENST00000508026 178 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 SNORA31.16-201ENST00000516773 139 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 RNU6-586P-201ENST00000517265 104 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 CYP4A27P-201ENST00000567218 190 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 AL078605.1-201ENST00000603529 500 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 Y_RNA.772-201ENST00000606692 102 ntBASIC2.78□□□□□ -1.96
TRIM38O00635 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TRIM38O00635 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM38O00635 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
TRIM38O00635 AC069528.2-201ENST00000624849 1991 ntBASIC2.78□□□□□ -1.97
TRIM38O00635 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM38O00635 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM38O00635 Y_RNA.286-201ENST00000364813 102 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 Y_RNA.292-201ENST00000364904 97 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 MIR196B-201ENST00000384852 84 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 RPS26P42-201ENST00000413485 326 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC091021.1-201ENST00000468051 388 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.77□□□□□ -1.97
TRIM38O00635 CKS1BP2-201ENST00000497342 240 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM38O00635 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.77□□□□□ -1.97
TRIM38O00635 AC018630.3-201ENST00000542637 96 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC104581.2-201ENST00000572227 430 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 MIR3144-201ENST00000579460 79 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 MIR3923-201ENST00000579521 83 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 MIR4659A-201ENST00000580269 81 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC072026.1-201ENST00000605023 201 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC005520.5-201ENST00000613926 164 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 AC233981.2-201ENST00000611524 1614 ntBASIC2.77□□□□□ -1.97
TRIM38O00635 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms