Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTND4P12-201ENST00000498999 1377 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 RNU6-1059P-201ENST00000363752 98 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 Y_RNA.301-201ENST00000364990 103 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 RNU6-159P-201ENST00000391080 106 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AL356776.1-201ENST00000406574 447 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 USP9YP30-201ENST00000430729 455 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.51□□□□□ -2.17
SLC28A1O00337 RNU6-221P-201ENST00000459541 99 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.51□□□□□ -2.17
SLC28A1O00337 AC116337.1-201ENST00000509680 687 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 RNU6-295P-201ENST00000516901 104 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.51□□□□□ -2.17
SLC28A1O00337 AC011494.1-201ENST00000596454 237 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AC002553.4-201ENST00000616896 331 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 AC009248.2-201ENST00000619826 254 ntBASIC1.51□□□□□ -2.17
SLC28A1O00337 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SLC28A1O00337 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
SLC28A1O00337 Y_RNA.86-201ENST00000363020 111 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 Y_RNA.490-201ENST00000384413 102 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 RNU6-417P-201ENST00000384712 107 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 MIR548B-201ENST00000385247 97 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.5□□□□□ -2.17
SLC28A1O00337 EIF1P1-201ENST00000421436 341 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 OOSP1P1-201ENST00000423265 274 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 USMG5P1-201ENST00000425964 177 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.5□□□□□ -2.17
SLC28A1O00337 AC025647.1-201ENST00000517879 253 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 UBL5P4-201ENST00000562584 236 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 AC007014.2-201ENST00000615581 479 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 AC068137.4-201ENST00000638485 296 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 AC027514.1-201ENST00000588561 1603 ntBASIC1.5□□□□□ -2.17
SLC28A1O00337 AC100821.1-201ENST00000523153 2479 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
SLC28A1O00337 RNU6-727P-201ENST00000363592 107 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 RNU6-595P-201ENST00000363944 107 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 SNORD87-201ENST00000364849 89 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 RNU6-1240P-201ENST00000365155 104 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 RNU6-793P-201ENST00000384233 104 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 RNU6-510P-201ENST00000391239 108 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.49□□□□□ -2.17
SLC28A1O00337 FCF1P9-201ENST00000412546 282 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 AC016909.1-201ENST00000415916 166 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.49□□□□□ -2.17
SLC28A1O00337 NDUFB4P10-201ENST00000452541 359 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 snoU13.27-201ENST00000459278 104 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 RNU6-329P-201ENST00000459618 107 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 AP000870.1-201ENST00000472927 406 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.49□□□□□ -2.17
SLC28A1O00337 Y_RNA.682-201ENST00000516457 100 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 AF235103.2-201ENST00000525753 346 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.49□□□□□ -2.17
SLC28A1O00337 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 AC068790.6-201ENST00000602558 258 ntBASIC1.49□□□□□ -2.17
SLC28A1O00337 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SLC28A1O00337 Y_RNA.67-201ENST00000362870 100 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 U3.8-201ENST00000363675 217 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 Y_RNA.287-201ENST00000364853 94 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 Y_RNA.405-201ENST00000383979 100 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 Y_RNA.415-201ENST00000384012 112 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 Y_RNA.451-201ENST00000384200 100 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 Y_RNA.524-201ENST00000384564 100 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 Y_RNA.561-201ENST00000384694 100 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 MIR504-201ENST00000385065 83 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 RNA5SP323-201ENST00000391094 133 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 SNORA26.9-201ENST00000391322 122 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 AC073910.1-201ENST00000445047 438 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC28A1O00337 SNORD5.1-201ENST00000458800 75 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 snoU13.15-201ENST00000459407 104 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 AC091179.3-201ENST00000474761 144 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 MTND5P5-201ENST00000503764 376 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC28A1O00337 MIR3945-201ENST00000581853 98 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 BNIP3P10-201ENST00000605360 577 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
SLC28A1O00337 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SLC28A1O00337 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SLC28A1O00337 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SLC28A1O00337 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 Y_RNA.179-201ENST00000363844 90 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 RNU6-842P-201ENST00000384269 107 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 COX6CP10-201ENST00000416832 224 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.47□□□□□ -2.17
SLC28A1O00337 Y_RNA.675-201ENST00000516389 149 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 Y_RNA.706-201ENST00000516933 99 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
SLC28A1O00337 MIR3683-201ENST00000580847 82 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 MIR4742-201ENST00000581069 85 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 MIR8063-201ENST00000621930 81 ntBASIC1.47□□□□□ -2.17
SLC28A1O00337 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
SLC28A1O00337 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms