Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SMKR1H3BMG3 RNU2-66P-201ENST00000410650 161 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 SEPT14P3-201ENST00000439401 183 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 AL732372.2-207ENST00000445840 183 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 SEPT14P2-201ENST00000453405 183 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 SEPT14P4-201ENST00000513445 186 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 RNU6-295P-201ENST00000516901 104 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 RNU6-165P-201ENST00000517170 99 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 RNU7-128P-201ENST00000517247 62 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 CYCSP23-201ENST00000519781 313 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 FO082796.1-201ENST00000523795 183 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 POLR3GP2-201ENST00000588366 668 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 AL022345.2-201ENST00000606307 135 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.9□□□□□ -2.27
SMKR1H3BMG3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 RNA5SP190-201ENST00000365222 118 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 RNU6-95P-201ENST00000384697 107 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AF228730.1-201ENST00000397972 663 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AL034345.1-201ENST00000407768 123 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 DAP3P1-201ENST00000441522 278 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 MTND1P11-201ENST00000456661 876 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 SNORD13-201ENST00000459299 104 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC004223.1-201ENST00000479840 271 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 TRBVA-201ENST00000498804 316 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 RNU7-99P-201ENST00000516271 62 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AK6P2-201ENST00000549020 471 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC027288.2-201ENST00000553028 243 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 DNAJC19P9-201ENST00000555084 351 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 ZNF519P2-201ENST00000557032 169 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC010525.2-201ENST00000590920 195 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC010620.1-201ENST00000601088 1102 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AL162424.1-201ENST00000602325 221 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 HSPE1P19-201ENST00000603327 295 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 Z99129.1-201ENST00000612510 255 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 DISC2.1-201ENST00000612827 205 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AL513423.1-201ENST00000621695 132 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 AC099654.12-201ENST00000639868 649 ntBASIC0.89□□□□□ -2.27
SMKR1H3BMG3 MTND4P12-201ENST00000498999 1377 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 RNU6-873P-201ENST00000363833 107 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 RNU6-280P-201ENST00000364145 104 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.372-201ENST00000365599 102 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 RNU6-541P-201ENST00000384709 110 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 Z82205.1-201ENST00000428456 297 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 RNU7-94P-201ENST00000459576 63 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AC107401.1-201ENST00000503426 685 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.665-201ENST00000516177 98 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 FRG2DP-202ENST00000566967 323 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AC023043.2-201ENST00000589678 1026 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AL513534.2-201ENST00000603836 250 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AC245008.1-201ENST00000608123 476 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 AL021879.1-201ENST00000611756 288 ntBASIC0.88□□□□□ -2.27
SMKR1H3BMG3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.88□□□□□ -2.27
SMKR1H3BMG3 CYCSP49-201ENST00000420810 319 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.87□□□□□ -2.27
SMKR1H3BMG3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.87□□□□□ -2.27
SMKR1H3BMG3 AC092991.1-201ENST00000477176 376 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.87□□□□□ -2.27
SMKR1H3BMG3 ACA59.1-201ENST00000515966 143 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 RNU6-1281P-201ENST00000516223 105 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 RNU1-92P-201ENST00000517017 135 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 SNORA70.22-201ENST00000517160 124 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 MIR5695-201ENST00000579717 85 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 MIR3683-201ENST00000580847 82 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 AL162413.1-201ENST00000603198 110 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 AL138726.1-201ENST00000614873 333 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 AC073349.3-201ENST00000617616 186 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 SNORD3E-202ENST00000627253 216 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 AL133216.2-202ENST00000634512 349 ntBASIC0.87□□□□□ -2.27
SMKR1H3BMG3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SMKR1H3BMG3 RNU6-727P-201ENST00000363592 107 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 RNU5F-3P-201ENST00000363767 117 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 MIR517A-201ENST00000385001 87 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 RNU6-159P-201ENST00000391080 106 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 Y_RNA.615-201ENST00000410769 117 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AL590632.1-201ENST00000424289 371 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 RAB28P5-201ENST00000427490 651 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.86□□□□□ -2.27
SMKR1H3BMG3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 UBE2DNL-203ENST00000474922 222 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC019235.1-201ENST00000503847 207 ntBASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.86□□□□□ -2.27
SMKR1H3BMG3 AC026407.1-201ENST00000518369 204 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms