Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC004223.2-201ENST00000590309 544 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 AL162424.1-201ENST00000602325 221 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 AC093424.1-201ENST00000604999 338 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 AC073349.3-201ENST00000617616 186 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 SNORD3E-202ENST00000627253 216 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 OR5AK4P-201ENST00000635912 903 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
RBFOX3A6NFN3 RNU4-76P-201ENST00000364509 141 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 RNU5A-6P-201ENST00000384136 116 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 RNU6-784P-201ENST00000384330 106 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 MIR200A-201ENST00000384875 90 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 MIR653-201ENST00000385279 96 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AL606923.1-201ENST00000406616 190 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 RNA5SP504-201ENST00000410676 117 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC114482.1-201ENST00000418010 247 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC002429.1-201ENST00000437672 148 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 PDCD5P2-201ENST00000507570 312 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 RNU6-113P-201ENST00000516653 101 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 MIR4452-201ENST00000583004 71 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC087683.1-201ENST00000591187 441 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AL078603.1-201ENST00000603824 313 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 SNORD11B-201ENST00000607707 90 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 AL603755.1-201ENST00000619504 163 ntBASIC0.66□□□□□ -2.3
RBFOX3A6NFN3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.65□□□□□ -2.3
RBFOX3A6NFN3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 RNU6-245P-201ENST00000384020 107 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 SNORD41-201ENST00000386967 70 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 MIR1276-201ENST00000408707 83 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC005002.2-201ENST00000438228 269 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AL445567.1-201ENST00000439121 144 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 SNORD124-201ENST00000459577 104 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 TRBVA-201ENST00000498804 316 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 HMGB1P29-201ENST00000505659 499 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 MTND1P5-201ENST00000517906 940 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC104576.1-201ENST00000524225 88 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AL590705.4-201ENST00000532209 134 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC025423.5-201ENST00000550230 219 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 MTND1P24-201ENST00000552175 861 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AL137100.2-201ENST00000555786 315 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC022432.1-201ENST00000595739 310 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AC136443.5-201ENST00000603741 370 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 MIR8076-201ENST00000611401 83 ntBASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.65□□□□□ -2.31
RBFOX3A6NFN3 ZNF204P-201ENST00000416749 2397 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 RNU6-1103P-201ENST00000384150 107 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 MIR450B-201ENST00000401182 78 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 TPTE2P5-203ENST00000458118 728 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 RNU7-94P-201ENST00000459576 63 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 RNU6-415P-201ENST00000516252 97 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 RNU7-99P-201ENST00000516271 62 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 RNA5SP54-201ENST00000516951 92 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 MTND1P35-201ENST00000526739 508 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 AL157687.1-201ENST00000554853 619 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 CPDP1-201ENST00000579660 283 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 U6.73-201ENST00000619194 103 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 AC106754.2-201ENST00000623006 233 ntBASIC0.64□□□□□ -2.31
RBFOX3A6NFN3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 SNORD115-8-201ENST00000363856 82 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 SNORD115-38-201ENST00000365037 82 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 RNU6-1158P-201ENST00000391167 107 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AF228730.1-201ENST00000397972 663 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 RNU6-325P-201ENST00000411132 105 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AL359672.1-201ENST00000442302 409 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 RNU1-117P-201ENST00000517041 158 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 RNA5SP454-201ENST00000517231 127 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AC090049.2-201ENST00000550377 109 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 MIR5692C1-201ENST00000585309 91 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 FAM71BP1-201ENST00000604431 523 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 AL354950.2-201ENST00000617939 290 ntBASIC0.63□□□□□ -2.31
RBFOX3A6NFN3 RNU6-199P-201ENST00000362954 107 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 SNORD114-22-201ENST00000365423 72 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms