Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC090617.3-201ENST00000573670 475 ntBASIC2.06□□□□□ -2.08
CCDC189A1A4V9 AC005899.2-201ENST00000584353 90 ntBASIC2.06□□□□□ -2.08
CCDC189A1A4V9 MIR4298-201ENST00000584380 73 ntBASIC2.06□□□□□ -2.08
CCDC189A1A4V9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC189A1A4V9 AC122108.2-201ENST00000611946 526 ntBASIC2.06□□□□□ -2.08
CCDC189A1A4V9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.06□□□□□ -2.08
CCDC189A1A4V9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC189A1A4V9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MIR449A-201ENST00000362113 91 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 RNU6-767P-201ENST00000384132 107 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MIR548B-201ENST00000385247 97 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 RNA5SP323-201ENST00000391094 133 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MIR548F5-201ENST00000408421 86 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 RPL37P10-201ENST00000412884 288 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MTCYBP10-201ENST00000424905 650 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MTND3P23-201ENST00000431980 347 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 AC069439.1-201ENST00000494739 167 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 AC008549.1-201ENST00000512900 643 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 Y_RNA.683-201ENST00000516508 93 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 CBX3P8-201ENST00000532412 525 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 UBL5P4-201ENST00000562584 236 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MIR3122-201ENST00000577243 73 ntBASIC2.05□□□□□ -2.08
CCDC189A1A4V9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC189A1A4V9 RNU6-417P-201ENST00000384712 107 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 RNU6-1050P-201ENST00000410388 107 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 COX6CP10-201ENST00000416832 224 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC189A1A4V9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC189A1A4V9 UBE2V1P7-201ENST00000446395 340 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 snoU13.27-201ENST00000459278 104 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC189A1A4V9 MIR5701-3-201ENST00000578890 82 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 MIR5695-201ENST00000579717 85 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 MIR5701-1-201ENST00000585138 82 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 AC022432.1-201ENST00000595739 310 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 AL355802.3-201ENST00000607571 545 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 AL359075.3-201ENST00000613288 217 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 MIR5701-2-201ENST00000615634 82 ntBASIC2.04□□□□□ -2.08
CCDC189A1A4V9 Y_RNA.2-201ENST00000362330 96 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 RNU4-82P-201ENST00000362443 140 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 SNORD33-201ENST00000362761 85 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 Y_RNA.67-201ENST00000362870 100 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC189A1A4V9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 RNU6-601P-201ENST00000384540 107 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 MIR190B-201ENST00000401119 79 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 Y_RNA.594-201ENST00000410373 140 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 AC116353.2-201ENST00000505332 712 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 RNU1-142P-201ENST00000516682 145 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC189A1A4V9 PISRT1.1-201ENST00000616930 107 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC189A1A4V9 AL133216.2-202ENST00000634512 349 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 AC099654.5-201ENST00000636479 350 ntBASIC2.03□□□□□ -2.08
CCDC189A1A4V9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC189A1A4V9 RNU6-727P-201ENST00000363592 107 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 SNORD87-201ENST00000364849 89 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 RNU1-78P-201ENST00000391248 165 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.619-201ENST00000410951 90 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 AC016909.1-201ENST00000415916 166 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 TOMM22P2-201ENST00000430735 237 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC189A1A4V9 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 APOOP3-201ENST00000536787 586 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 AL137100.2-201ENST00000555786 315 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC189A1A4V9 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 MIR3684-201ENST00000579779 74 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 uc_338.5-201ENST00000611839 155 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 MIR219B-201ENST00000637023 88 ntBASIC2.02□□□□□ -2.09
CCDC189A1A4V9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCDC189A1A4V9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC189A1A4V9 MTND5P35-201ENST00000557537 1720 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.166-201ENST00000363730 102 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.184-201ENST00000363884 108 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.339-201ENST00000365325 102 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.364-201ENST00000365532 101 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 AL139156.1-201ENST00000412785 841 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC189A1A4V9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC189A1A4V9 AC084782.3-201ENST00000612282 578 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 AC006435.5-201ENST00000624486 112 ntBASIC2.01□□□□□ -2.09
CCDC189A1A4V9 CASC19-280ENST00000642102 1351 ntBASIC2□□□□□ -2.09
CCDC189A1A4V9 MIR126-201ENST00000362291 85 ntBASIC2□□□□□ -2.09
CCDC189A1A4V9 RNY1P16-201ENST00000363063 111 ntBASIC2□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.106-201ENST00000363189 100 ntBASIC2□□□□□ -2.09
CCDC189A1A4V9 RNU4-42P-201ENST00000364738 142 ntBASIC2□□□□□ -2.09
CCDC189A1A4V9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2□□□□□ -2.09
CCDC189A1A4V9 RNU6-281P-201ENST00000384212 103 ntBASIC2□□□□□ -2.09
CCDC189A1A4V9 Y_RNA.599-201ENST00000410489 109 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms