Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NOTCH3Q9UM47 AC110491.1-201ENST00000562191 2010 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNA5SP383-201ENST00000362934 120 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU6-1167P-201ENST00000363227 94 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.261-201ENST00000364631 102 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU6-1289P-201ENST00000384431 106 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 SNORA40.5-201ENST00000391061 128 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 Z85995.1-201ENST00000415547 335 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 EBAG9P1-201ENST00000418955 543 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AC063976.4-201ENST00000421971 163 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 NDUFB4P7-201ENST00000423198 363 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RN7SL499P-201ENST00000481141 276 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RN7SKP179-201ENST00000516126 217 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 TUG1_4.1-201ENST00000619464 181 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AL360181.4-201ENST00000621752 134 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU6-942P-201ENST00000363002 107 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU6-173P-201ENST00000364215 104 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU4-11P-201ENST00000365287 132 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 SNORA22-201ENST00000383907 134 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU6-147P-201ENST00000383983 107 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RPL23AP95-201ENST00000426806 265 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RPL26P26-201ENST00000480251 434 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AC096725.1-201ENST00000514266 313 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 RNU6-589P-201ENST00000516485 107 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 SUMO2P18-201ENST00000518873 252 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AC022616.8-201ENST00000533569 253 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AC046143.2-201ENST00000609789 160 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 AC131238.1-201ENST00000617135 328 ntBASIC2.06□□□□□ -2.08
NOTCH3Q9UM47 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC016925.1-201ENST00000458303 298 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AP000870.1-201ENST00000472927 406 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 MIR5582-201ENST00000579697 68 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AL670379.2-201ENST00000604983 252 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC008568.2-201ENST00000623862 2313 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 RNU6-801P-201ENST00000364087 105 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 SNORD114-30-201ENST00000364448 72 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 MIR10A-201ENST00000385043 110 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 MIR153-2-201ENST00000385225 87 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 RNU6-460P-201ENST00000391158 108 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC099336.2-201ENST00000422457 254 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC098614.2-201ENST00000426040 255 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC243964.1-201ENST00000441814 261 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AL078601.1-201ENST00000444542 271 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC125238.1-201ENST00000448842 249 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC090525.1-201ENST00000479116 478 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 RAC1P5-201ENST00000512182 576 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.797-201ENST00000515977 94 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC021231.3-201ENST00000558497 370 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 MIR4744-201ENST00000581563 82 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 AC013791.1-201ENST00000616619 62 ntBASIC2.05□□□□□ -2.08
NOTCH3Q9UM47 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC009541.1-201ENST00000438279 2662 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RNU6-1272P-201ENST00000362776 107 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RNU6-105P-201ENST00000363909 104 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.230-201ENST00000364348 109 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 Y_RNA.338-201ENST00000365320 114 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RNU6-146P-201ENST00000384602 108 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 MIR301A-201ENST00000385261 86 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC245291.1-201ENST00000419501 328 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RPS15AP5-201ENST00000436276 388 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AL353705.4-201ENST00000449661 238 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RPS27P29-201ENST00000463110 252 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RN7SL330P-201ENST00000469709 307 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RPL23AP49-201ENST00000492925 468 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RNU5E-3P-201ENST00000515913 68 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC090049.2-201ENST00000550377 109 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC005176.2-201ENST00000596933 147 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AL670379.3-201ENST00000605040 251 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AL357075.2-201ENST00000614906 189 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AC004825.2-201ENST00000616634 455 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 AL353997.5-201ENST00000618886 171 ntBASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.04□□□□□ -2.08
NOTCH3Q9UM47 RNU6-834P-201ENST00000362367 110 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms