Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 TOMM22P2-201ENST00000430735 237 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 AL161788.1-201ENST00000441805 169 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 RNU7-14P-201ENST00000459331 62 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 SRIP1-201ENST00000489235 288 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.673-201ENST00000516306 88 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 AC018630.3-201ENST00000542637 96 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 AC022080.3-201ENST00000544433 482 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 AC093732.2-201ENST00000607950 274 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.54□□□□□ -1.84
DDX41Q9UJV9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
DDX41Q9UJV9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
DDX41Q9UJV9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 SNORA25.1-201ENST00000362326 128 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.54-201ENST00000362766 105 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 RNU6-944P-201ENST00000364023 107 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 RNU6-1305P-201ENST00000364353 104 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.286-201ENST00000364813 102 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 MIR586-201ENST00000385035 97 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AL139281.1-201ENST00000422120 335 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 COTL1P1-201ENST00000422309 375 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 NDUFB4P10-201ENST00000452541 359 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AC090515.1-201ENST00000465295 476 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 RN7SL499P-201ENST00000481141 276 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AL033523.1-201ENST00000605153 153 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AL590240.4-201ENST00000616908 390 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AC141273.2-201ENST00000618989 130 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 AC091932.3-201ENST00000624223 323 ntBASIC3.53□□□□□ -1.84
DDX41Q9UJV9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX41Q9UJV9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.20-201ENST00000362479 113 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 SNORD27-201ENST00000363981 72 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 RNU6-234P-201ENST00000365229 104 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 SNORD15B-201ENST00000384714 146 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 AC114982.1-201ENST00000469402 321 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 MIR449C-201ENST00000516047 92 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 RNU6-155P-201ENST00000516347 100 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.680-201ENST00000516441 93 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 MIR4753-201ENST00000585119 83 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 BX284668.6-201ENST00000606899 438 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 AC008873.1-201ENST00000625051 138 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 MIR6733-201ENST00000635723 61 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 AC138915.1-201ENST00000565427 1685 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 AC000403.1-201ENST00000613696 3585 ntBASIC3.52□□□□□ -1.85
DDX41Q9UJV9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX41Q9UJV9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.383-201ENST00000383855 97 ntBASIC3.51□□□□□ -1.85
DDX41Q9UJV9 RNU6-546P-201ENST00000383991 107 ntBASIC3.51□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.446-201ENST00000384178 104 ntBASIC3.51□□□□□ -1.85
DDX41Q9UJV9 RNU2-54P-201ENST00000410299 190 ntBASIC3.51□□□□□ -1.85
DDX41Q9UJV9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX41Q9UJV9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX41Q9UJV9 AC055872.1-201ENST00000570978 278 ntBASIC3.51□□□□□ -1.85
DDX41Q9UJV9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX41Q9UJV9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
DDX41Q9UJV9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 RNU6-1266P-201ENST00000362794 105 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 SNORA71.1-201ENST00000364523 117 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 SNORA67.2-201ENST00000384300 149 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 MIR181B1-201ENST00000385240 110 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 SNORA26.7-201ENST00000391288 122 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 MIR887-201ENST00000401258 79 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AL603910.2-201ENST00000407268 136 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 RNA5SP504-201ENST00000410676 117 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX41Q9UJV9 MTND1P19-201ENST00000511780 315 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AC023043.3-201ENST00000593113 385 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AL109918.3-201ENST00000603072 338 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 U2.14-201ENST00000615943 113 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 AC078938.1-201ENST00000620993 318 ntBASIC3.5□□□□□ -1.85
DDX41Q9UJV9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
DDX41Q9UJV9 Y_RNA.101-201ENST00000363154 102 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 U8.9-201ENST00000365667 134 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 RNU2-32P-201ENST00000411193 191 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 AC009963.1-201ENST00000417265 157 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 AC107083.1-201ENST00000439643 279 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.49□□□□□ -1.85
DDX41Q9UJV9 AC109329.2-201ENST00000519658 482 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms