Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 SNRPEP10-201ENST00000420249 274 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 RNU6-1208P-201ENST00000459588 107 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 SRRM1P2-201ENST00000464531 1192 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.25□□□□□ -2.21
HPF1Q9NWY4 MIR4742-201ENST00000581069 85 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 AC092807.2-201ENST00000609367 243 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 AL359075.3-201ENST00000613288 217 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.25□□□□□ -2.21
HPF1Q9NWY4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.24□□□□□ -2.21
HPF1Q9NWY4 AC083798.1-201ENST00000472671 131 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 AC092436.3-201ENST00000511788 257 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 AP001330.5-201ENST00000607176 411 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 SNORD11B-201ENST00000607707 90 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 AC021506.2-201ENST00000612354 169 ntBASIC1.24□□□□□ -2.21
HPF1Q9NWY4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNU6-1322P-201ENST00000364309 107 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNU6-321P-201ENST00000410912 106 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC016909.1-201ENST00000415916 166 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 MTCO2P16-201ENST00000436962 677 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNU6-1332P-201ENST00000516666 104 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNA5SP54-201ENST00000516951 92 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC025647.1-201ENST00000517879 253 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 SUMO2P16-201ENST00000519475 264 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC100830.2-201ENST00000581636 240 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AC017083.3-201ENST00000609955 700 ntBASIC1.23□□□□□ -2.21
HPF1Q9NWY4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.23□□□□□ -2.21
HPF1Q9NWY4 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 RNU4-20P-201ENST00000365601 151 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 Y_RNA.582-201ENST00000391023 95 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HPF1Q9NWY4 AL356776.1-201ENST00000406574 447 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.22□□□□□ -2.21
HPF1Q9NWY4 RNU6-221P-201ENST00000459541 99 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 MTCYBP18-201ENST00000501056 747 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 AC091133.4-201ENST00000511142 308 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 CPDP1-201ENST00000579660 283 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 AC004492.1-201ENST00000607036 742 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 AC068647.2-201ENST00000637380 353 ntBASIC1.22□□□□□ -2.21
HPF1Q9NWY4 RNY1P10-201ENST00000363268 113 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 RNU1-22P-201ENST00000363334 158 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 SNORA69-201ENST00000383895 132 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 RNU6-245P-201ENST00000384020 107 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 SNORA67.2-201ENST00000384300 149 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 MIR450B-201ENST00000401182 78 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AC010154.1-201ENST00000425857 269 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 RPL23AP75-201ENST00000491601 451 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AC103851.1-201ENST00000506833 274 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AC104383.1-201ENST00000530297 370 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AC073534.2-201ENST00000620377 381 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AC078883.4-201ENST00000623218 367 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 AP000770.2-201ENST00000623694 100 ntBASIC1.21□□□□□ -2.22
HPF1Q9NWY4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HPF1Q9NWY4 Y_RNA.481-201ENST00000384373 102 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AL606517.2-201ENST00000442855 241 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
HPF1Q9NWY4 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 HSPE1P13-201ENST00000451143 297 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AC007834.2-201ENST00000536310 343 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 TPRKBP2-201ENST00000565969 475 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
HPF1Q9NWY4 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
HPF1Q9NWY4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HPF1Q9NWY4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
HPF1Q9NWY4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
HPF1Q9NWY4 Y_RNA.553-201ENST00000384670 102 ntBASIC1.19□□□□□ -2.22
HPF1Q9NWY4 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms