Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC025647.1-201ENST00000517879 253 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.92□□□□□ -2.26
CLN6Q9NWW5 TPRKBP2-201ENST00000565969 475 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 BX284668.6-201ENST00000606899 438 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AC027335.2-201ENST00000624030 375 ntBASIC0.92□□□□□ -2.26
CLN6Q9NWW5 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.92□□□□□ -2.26
CLN6Q9NWW5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CLN6Q9NWW5 RNU6-1240P-201ENST00000365155 104 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 RNU6-784P-201ENST00000384330 106 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 MIR23A-201ENST00000385245 73 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CLN6Q9NWW5 MIR450B-201ENST00000401182 78 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 RN7SKP200-201ENST00000410564 320 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AL606517.2-201ENST00000442855 241 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 RPS27P1-201ENST00000450552 247 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AC103851.1-201ENST00000506833 274 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 RNU6-344P-201ENST00000516635 111 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AL022345.2-201ENST00000606307 135 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AC092807.2-201ENST00000609367 243 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.91□□□□□ -2.26
CLN6Q9NWW5 AL157834.3-201ENST00000615543 103 ntBASIC0.91□□□□□ -2.26
CLN6Q9NWW5 SNORA67.2-201ENST00000384300 149 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CLN6Q9NWW5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.9□□□□□ -2.27
CLN6Q9NWW5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.9□□□□□ -2.27
CLN6Q9NWW5 SNRPEP10-201ENST00000420249 274 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.9□□□□□ -2.27
CLN6Q9NWW5 MTCO2P16-201ENST00000436962 677 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 RPL39P38-201ENST00000467018 153 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 BET1P1-201ENST00000482276 359 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 RNU6-1332P-201ENST00000516666 104 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 CYCSP23-201ENST00000519781 313 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 SNORD11B-201ENST00000607707 90 ntBASIC0.9□□□□□ -2.27
CLN6Q9NWW5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CLN6Q9NWW5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RNU4-20P-201ENST00000365601 151 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 MIR487A-201ENST00000385009 80 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 EIF4E2P1-201ENST00000393781 255 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RPL23AP36-201ENST00000413895 458 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC245047.3-201ENST00000429428 127 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RNU6-261P-201ENST00000459506 102 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RNU6-1208P-201ENST00000459588 107 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RPL23AP75-201ENST00000491601 451 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC091885.1-201ENST00000506658 268 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 SNORA31.10-201ENST00000516482 106 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RNA5SP54-201ENST00000516951 92 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RNA5SP454-201ENST00000517231 127 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.89□□□□□ -2.27
CLN6Q9NWW5 CPDP1-201ENST00000579660 283 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC022217.4-201ENST00000604389 163 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AC012676.2-201ENST00000619258 186 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 MIR8054-201ENST00000620877 86 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 AL391516.1-201ENST00000554380 2449 ntBASIC0.89□□□□□ -2.27
CLN6Q9NWW5 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 MIR764-201ENST00000390811 85 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 RNU6-1186P-201ENST00000410429 97 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AC005002.2-201ENST00000438228 269 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AC083798.1-201ENST00000472671 131 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.88□□□□□ -2.27
CLN6Q9NWW5 RNU6-165P-201ENST00000517170 99 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AC100830.2-201ENST00000581636 240 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 AP001330.5-201ENST00000607176 411 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 MIR6078-201ENST00000611069 100 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 U6.108-201ENST00000637764 58 ntBASIC0.88□□□□□ -2.27
CLN6Q9NWW5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.87□□□□□ -2.27
CLN6Q9NWW5 SNORA69-201ENST00000383895 132 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 RNU6-245P-201ENST00000384020 107 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC092991.1-201ENST00000477176 376 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.87□□□□□ -2.27
CLN6Q9NWW5 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 SNORA70.22-201ENST00000517160 124 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 MTND1P5-201ENST00000517906 940 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC104383.1-201ENST00000530297 370 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC016957.1-201ENST00000534895 309 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC008088.1-201ENST00000580993 280 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC017083.3-201ENST00000609955 700 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 AC073534.2-201ENST00000620377 381 ntBASIC0.87□□□□□ -2.27
CLN6Q9NWW5 RNU6-1266P-201ENST00000362794 105 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 RNU6-1322P-201ENST00000364309 107 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 Y_RNA.582-201ENST00000391023 95 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 MRPL42P3-201ENST00000401492 326 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 RNA5SP504-201ENST00000410676 117 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms