Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC022432.1-201ENST00000595739 310 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AC097065.2-201ENST00000608159 533 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AC097520.1-201ENST00000624435 385 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 MIR3974-201ENST00000637126 96 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 U3.8-201ENST00000363675 217 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-137P-201ENST00000363680 108 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 SNORD113-7-201ENST00000363762 77 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-124P-201ENST00000363861 145 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-522P-201ENST00000364497 107 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNA5SP467-201ENST00000391274 118 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNA5SP504-201ENST00000410676 117 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 MTND3P16-201ENST00000452205 344 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC004223.1-201ENST00000479840 271 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC026371.1-201ENST00000551867 419 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC004584.2-201ENST00000570407 410 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AL390123.1-201ENST00000603216 237 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC027335.2-201ENST00000624030 375 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 AC090582.1-201ENST00000636321 199 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 U6.108-201ENST00000637764 58 ntBASIC0.8□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1085P-201ENST00000363576 107 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 RNU5F-3P-201ENST00000363767 117 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 RNU4-9P-201ENST00000364951 139 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1042P-201ENST00000384204 107 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 SNORA40.6-201ENST00000391153 128 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AL591704.2-201ENST00000421658 181 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 DAP3P1-201ENST00000441522 278 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AC079354.2-201ENST00000453523 154 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 RPS29P29-201ENST00000456396 171 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 TPT1P7-201ENST00000458300 517 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 TRBVA-201ENST00000498804 316 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-117P-201ENST00000517041 158 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AL137100.2-201ENST00000555786 315 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 TPRKBP2-201ENST00000565969 475 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AC022217.4-201ENST00000604389 163 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AL513423.1-201ENST00000621695 132 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 AC068137.3-201ENST00000639191 341 ntBASIC0.79□□□□□ -2.28
SND1-IT1Q9HBX3 OR4G1P-203ENST00000641984 1631 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 SNORD50.1-201ENST00000362987 71 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 Y_RNA.359-201ENST00000365498 102 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1119P-201ENST00000384349 108 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 MIR153-2-201ENST00000385225 87 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 MRPL42P3-201ENST00000401492 326 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC245047.3-201ENST00000429428 127 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AL353572.1-201ENST00000442490 417 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AL606517.2-201ENST00000442855 241 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 RPS29P28-201ENST00000446439 141 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 RNU7-94P-201ENST00000459576 63 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 OR2A41P-201ENST00000473586 105 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC010486.3-201ENST00000511602 785 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 SNORA31.10-201ENST00000516482 106 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC119751.7-201ENST00000600494 245 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AL162424.1-201ENST00000602325 221 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AL022345.2-201ENST00000606307 135 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 BX284668.6-201ENST00000606899 438 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 AC012676.2-201ENST00000619258 186 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 MIR8054-201ENST00000620877 86 ntBASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.78□□□□□ -2.28
SND1-IT1Q9HBX3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
SND1-IT1Q9HBX3 Y_RNA.319-201ENST00000365138 92 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AL356776.1-201ENST00000406574 447 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AL034345.1-201ENST00000407768 123 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 MIR1185-2-201ENST00000408687 86 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 ERLEC1P1-201ENST00000433806 578 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 NDUFA5P4-201ENST00000436704 385 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 SEPT14P3-201ENST00000439401 183 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AL732372.2-207ENST00000445840 183 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 SEPT14P2-201ENST00000453405 183 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 SEPT14P4-201ENST00000513445 186 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 RNA5SP454-201ENST00000517231 127 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 RNU7-128P-201ENST00000517247 62 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 SUMO2P16-201ENST00000519475 264 ntBASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.77□□□□□ -2.29
SND1-IT1Q9HBX3 FO082796.1-201ENST00000523795 183 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms