Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-453P-201ENST00000516819 85 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 AC025281.1-201ENST00000567026 265 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-91P-201ENST00000607774 107 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 AL078604.3-201ENST00000615580 211 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-655P-201ENST00000362858 107 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 RNU4-11P-201ENST00000365287 132 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 SNORA72.4-201ENST00000384174 132 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 SNORA8.3-201ENST00000384679 139 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 AP000567.1-201ENST00000406413 156 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 RNU7-23P-201ENST00000459465 62 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 AC093663.1-201ENST00000497190 394 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 RN7SKP164-201ENST00000516138 266 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 AC022616.8-201ENST00000533569 253 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 AC012493.2-201ENST00000595083 291 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 XIST_intron.1-201ENST00000619444 68 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 MIR3658-201ENST00000636291 56 ntBASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SEC61A2Q9H9S3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RNA5SP387-201ENST00000364226 106 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 MIR626-201ENST00000385032 94 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 MIR548B-201ENST00000385247 97 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-750P-201ENST00000390946 107 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RNA5SP252-201ENST00000391131 119 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RNA5SP38-201ENST00000410750 119 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 EBAG9P1-201ENST00000418955 543 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AC245047.8-201ENST00000456455 284 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 RPS3P1-201ENST00000456781 192 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AC091179.1-201ENST00000461606 579 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 SCARNA8-201ENST00000515924 131 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 MIR548X2-201ENST00000579776 100 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 uc_338.1-201ENST00000612113 180 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AC091953.5-201ENST00000622919 233 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 U6.115-201ENST00000636045 103 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 AL049781.1-201ENST00000623195 3585 ntBASIC2.95□□□□□ -1.94
SEC61A2Q9H9S3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AL356274.2-201ENST00000624379 3752 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.81-201ENST00000362997 102 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-969P-201ENST00000383900 105 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 RN7SKP111-201ENST00000410349 271 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 TOMM22P2-201ENST00000430735 237 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 CST9LP2-201ENST00000437612 320 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 snoU13.22-201ENST00000459428 104 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AC010409.1-201ENST00000487382 476 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AC104027.1-201ENST00000521887 300 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 MIR4431-201ENST00000579990 94 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
SEC61A2Q9H9S3 AC010332.2-201ENST00000613083 1904 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 SNORD56.3-201ENST00000363507 71 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-103P-201ENST00000363686 107 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-899P-201ENST00000363947 107 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNA5SP267-201ENST00000364893 126 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 SNORA67.2-201ENST00000384300 149 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU1-57P-201ENST00000384491 166 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-710P-201ENST00000410424 105 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU7-141P-201ENST00000459304 62 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AC091153.1-201ENST00000466297 402 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms