Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 AC074085.1-201ENST00000413598 418 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 USMG5P1-201ENST00000425964 177 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 RPS3AP52-201ENST00000435639 297 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 FGF7P6-202ENST00000451282 293 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 AC112492.4-201ENST00000456549 352 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 HMGN2P23-201ENST00000456759 269 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 UBL5P4-201ENST00000562584 236 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 AC092794.1-201ENST00000612734 582 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 snoZ196.1-201ENST00000625269 89 ntBASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC68Q9H2F9 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 RNU5F-3P-201ENST00000363767 117 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 RNU6-159P-201ENST00000391080 106 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 MIR1253-201ENST00000408273 105 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AC007098.1-201ENST00000420122 367 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 CST2P1-201ENST00000425770 87 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 MTCO3P29-201ENST00000432119 779 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 TRBV12-1-201ENST00000479785 344 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 RNU6-1016P-201ENST00000516689 94 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 CBX3P8-201ENST00000532412 525 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AC084364.2-201ENST00000546924 395 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AC018462.2-201ENST00000605375 395 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AL353149.1-201ENST00000610667 244 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 MIR338-201ENST00000636369 67 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 MTND4P12-201ENST00000498999 1377 ntBASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
CCDC68Q9H2F9 RNU6-727P-201ENST00000363592 107 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 Y_RNA.473-201ENST00000384333 102 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC019129.1-201ENST00000403786 261 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 MIR548K-201ENST00000408406 116 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RNA5SP504-201ENST00000410676 117 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC245047.4-201ENST00000433189 144 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC107399.1-201ENST00000451226 265 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AP000870.1-201ENST00000472927 406 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RPL36AP21-201ENST00000490372 323 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RPL23AP63-201ENST00000498752 471 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 Y_RNA.706-201ENST00000516933 99 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC091544.4-201ENST00000555268 342 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC005668.1-201ENST00000571142 476 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC104581.2-201ENST00000572227 430 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC011494.1-201ENST00000596454 237 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 MIR8074-201ENST00000615081 81 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC68Q9H2F9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.9□□□□□ -2.1
CCDC68Q9H2F9 Y_RNA.2-201ENST00000362330 96 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 snoU2-30.2-201ENST00000362805 70 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 RNU6-414P-201ENST00000363705 104 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 SNORD87-201ENST00000364849 89 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AC025465.3-201ENST00000510570 311 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AC026782.1-201ENST00000512952 449 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 MIR4648-201ENST00000580107 72 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AL355802.3-201ENST00000607571 545 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AC100812.1-201ENST00000607622 580 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.20-201ENST00000613956 192 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CCDC68Q9H2F9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms