Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MIR4790-201ENST00000577799 79 ntBASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 AC018462.2-201ENST00000605375 395 ntBASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 AL353149.1-201ENST00000610667 244 ntBASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 AC068205.3-201ENST00000636385 468 ntBASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 ZNF204P-201ENST00000416749 2397 ntBASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HDHD3Q9BSH5 Y_RNA.184-201ENST00000363884 108 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 RNU6-245P-201ENST00000384020 107 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 RNU6-159P-201ENST00000391080 106 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 PDCL2P1-201ENST00000419302 352 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 RNU2-34P-201ENST00000516534 121 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 RNA5SP54-201ENST00000516951 92 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 SNRPGP20-201ENST00000604477 205 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 MIR6128-201ENST00000615528 109 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 AC005858.4-201ENST00000623191 700 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 MTND4P12-201ENST00000498999 1377 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 AL159152.1-201ENST00000635019 2587 ntBASIC1.28□□□□□ -2.2
HDHD3Q9BSH5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
HDHD3Q9BSH5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 ZNF299P-201ENST00000406845 1804 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 CASC19-280ENST00000642102 1351 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1283P-201ENST00000365314 105 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.473-201ENST00000384333 102 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 MIR153-2-201ENST00000385225 87 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 MT-TL1-201ENST00000386347 75 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 MIR548F5-201ENST00000408421 86 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 AC016717.1-201ENST00000448918 286 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNU6-498P-201ENST00000459468 107 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 AC046134.1-201ENST00000514454 666 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNU1-41P-201ENST00000516161 162 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.670-201ENST00000516255 105 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNU1-48P-201ENST00000516400 162 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.691-201ENST00000516611 103 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 RNA5SP384-201ENST00000516615 116 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 AP000889.1-201ENST00000530968 660 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 CBX3P8-201ENST00000532412 525 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 AC005014.2-201ENST00000607795 599 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 U6atac.1-201ENST00000616025 117 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 MIR338-201ENST00000636369 67 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HDHD3Q9BSH5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RNU6-845P-201ENST00000362578 103 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RNU6-862P-201ENST00000362804 105 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.166-201ENST00000363730 102 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.319-201ENST00000365138 92 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.490-201ENST00000384413 102 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 MIR10B-201ENST00000385011 110 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 MTCO3P29-201ENST00000432119 779 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RPS3AP52-201ENST00000435639 297 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 HMGB1P18-201ENST00000438801 619 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 SNORA25.15-201ENST00000516487 89 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RNU6-1016P-201ENST00000516689 94 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 UBL5P4-201ENST00000562584 236 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 MIR5094-201ENST00000578766 85 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 AC093913.1-201ENST00000614178 329 ntBASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
HDHD3Q9BSH5 RNU6-874P-201ENST00000362390 105 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RNU1-62P-201ENST00000362599 164 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.48-201ENST00000362710 103 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.88-201ENST00000363029 99 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.132-201ENST00000363421 102 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RNU6-873P-201ENST00000363833 107 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 SNORA63D-201ENST00000364359 132 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RNU6-593P-201ENST00000364716 112 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.405-201ENST00000383979 100 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.451-201ENST00000384200 100 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.524-201ENST00000384564 100 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.561-201ENST00000384694 100 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 Y_RNA.594-201ENST00000410373 140 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RNU4-14P-201ENST00000410858 122 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 RN7SKP210-201ENST00000459176 261 ntBASIC1.25□□□□□ -2.21
HDHD3Q9BSH5 AC011406.1-201ENST00000512440 370 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms