Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 EIF1P1-201ENST00000421436 341 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.22□□□□□ -2.21
RPRD1AQ96P16 MTCO1P29-201ENST00000496868 288 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 AC093852.1-201ENST00000503587 266 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 RNU6-1332P-201ENST00000516666 104 ntBASIC1.22□□□□□ -2.21
RPRD1AQ96P16 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.22□□□□□ -2.21
RPRD1AQ96P16 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.22□□□□□ -2.21
RPRD1AQ96P16 MTND4P5-201ENST00000435821 1374 ntBASIC1.21□□□□□ -2.21
RPRD1AQ96P16 SNORA72.2-201ENST00000365028 127 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 RNU6-214P-201ENST00000384130 107 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 SNORA67.2-201ENST00000384300 149 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 RNU6-1119P-201ENST00000384349 108 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 RNU6-417P-201ENST00000384712 107 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 EIF4E2P1-201ENST00000393781 255 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AC016909.1-201ENST00000415916 166 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.21□□□□□ -2.22
RPRD1AQ96P16 MIR4709-201ENST00000577272 72 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AC100830.2-201ENST00000581636 240 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AC146944.4-201ENST00000602697 718 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
RPRD1AQ96P16 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.21□□□□□ -2.22
RPRD1AQ96P16 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.21□□□□□ -2.22
RPRD1AQ96P16 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
RPRD1AQ96P16 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
RPRD1AQ96P16 RNU6-522P-201ENST00000364497 107 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 RPL37P10-201ENST00000412884 288 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 SNRPEP10-201ENST00000420249 274 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 MTCO1P20-201ENST00000425366 358 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 RNU7-34P-201ENST00000459394 64 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 RNU7-57P-201ENST00000459540 60 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 MTND1P35-201ENST00000526739 508 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AL442163.3-201ENST00000554110 156 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 MTND1P15-201ENST00000579262 949 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 SNRPGP20-201ENST00000604477 205 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 RN7SKP299-201ENST00000606679 301 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AC097520.1-201ENST00000624435 385 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AC008873.1-201ENST00000625051 138 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 MIR6863-201ENST00000636112 90 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 AC121333.1-201ENST00000567488 2709 ntBASIC1.2□□□□□ -2.22
RPRD1AQ96P16 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPRD1AQ96P16 MTND5P26-201ENST00000426018 1752 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 ZNF204P-201ENST00000416749 2397 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 RNU6-1065P-201ENST00000384513 106 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 MIR515-2-201ENST00000384883 83 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 MIR515-1-201ENST00000384884 83 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 RNA5SP467-201ENST00000391274 118 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.19□□□□□ -2.22
RPRD1AQ96P16 AC083904.1-201ENST00000487828 231 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 RPL23AP75-201ENST00000491601 451 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.19□□□□□ -2.22
RPRD1AQ96P16 AL158211.1-201ENST00000566763 763 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 MIR3611-201ENST00000584484 83 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 AC073534.2-201ENST00000620377 381 ntBASIC1.19□□□□□ -2.22
RPRD1AQ96P16 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPRD1AQ96P16 SNORD113-7-201ENST00000363762 77 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 RNU6-933P-201ENST00000384424 107 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 RNA5SP109-201ENST00000391010 116 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 RNA5SP504-201ENST00000410676 117 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.18□□□□□ -2.22
RPRD1AQ96P16 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.18□□□□□ -2.22
RPRD1AQ96P16 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 HMGN1P12-201ENST00000499125 195 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.18□□□□□ -2.22
RPRD1AQ96P16 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 RNU6-1146P-201ENST00000516282 102 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.18□□□□□ -2.22
RPRD1AQ96P16 AL133215.3-201ENST00000609801 448 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 AC009033.1-201ENST00000624279 431 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 AL078596.1-201ENST00000624856 447 ntBASIC1.18□□□□□ -2.22
RPRD1AQ96P16 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RPRD1AQ96P16 AP000568.1-201ENST00000282964 442 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 SNORD50.1-201ENST00000362987 71 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 Y_RNA.231-201ENST00000364358 102 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 Y_RNA.481-201ENST00000384373 102 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RPL21P1-201ENST00000399532 476 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC074290.1-201ENST00000448883 135 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RPS27P1-201ENST00000450552 247 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RNU7-187P-201ENST00000458985 68 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RPS26P45-201ENST00000471748 340 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AL163195.1-201ENST00000496941 348 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms