Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RNU1-131P-201ENST00000458943 161 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 RNU7-87P-201ENST00000459343 62 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AC091179.3-201ENST00000474761 144 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 RNVU1-2-201ENST00000516326 135 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC136Q96JN2 MIR4435-1-201ENST00000582552 80 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 AC013412.1-201ENST00000610687 192 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 MTND5P16-201ENST00000460269 1703 ntBASIC2.64□□□□□ -1.99
CCDC136Q96JN2 RNU6-890P-201ENST00000384121 107 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.529-201ENST00000384586 119 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC136Q96JN2 RNU4-53P-201ENST00000410828 140 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 RNA5SP508-201ENST00000411327 119 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC136Q96JN2 RNU6-344P-201ENST00000516635 111 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 AC004584.2-201ENST00000570407 410 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 AC005899.2-201ENST00000584353 90 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 MIR1244-1-201ENST00000612829 85 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 AC083806.3-201ENST00000614016 455 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 MIR1244-3-201ENST00000635744 85 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 MIR1244-2-201ENST00000636449 85 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 MIR1244-4-202ENST00000636813 85 ntBASIC2.63□□□□□ -1.99
CCDC136Q96JN2 AL159152.1-201ENST00000635019 2587 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 RNU6-137P-201ENST00000363680 108 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 RNU6-99P-201ENST00000364721 107 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.356-201ENST00000365475 113 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 RNU6-1297P-201ENST00000384415 104 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 RNU6-1009P-201ENST00000390996 107 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 MTCYBP10-201ENST00000424905 650 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC136Q96JN2 MTND2P29-201ENST00000438595 412 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AC093019.1-201ENST00000443135 252 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AC097473.1-201ENST00000508142 408 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 RNU6-307P-201ENST00000516743 106 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AL355375.2-201ENST00000574825 175 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 MIR5690-201ENST00000583739 73 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC136Q96JN2 SNORD11B-201ENST00000607707 90 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.804-201ENST00000615262 101 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AL078596.1-201ENST00000624856 447 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 AC008873.1-201ENST00000625051 138 ntBASIC2.62□□□□□ -1.99
CCDC136Q96JN2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC136Q96JN2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.70-201ENST00000362886 110 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 RNU6-975P-201ENST00000384296 105 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 SNORD116-29-201ENST00000384516 83 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 MIR586-201ENST00000385035 97 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 MTATP6P23-201ENST00000440153 476 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 AL357134.1-201ENST00000445848 426 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 U8.22-201ENST00000459141 133 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 RPL17P19-201ENST00000489069 552 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC136Q96JN2 RNU6-1114P-201ENST00000516022 107 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 AC093027.1-201ENST00000546698 429 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC136Q96JN2 MZT1P2-201ENST00000604387 248 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC136Q96JN2 AL590808.1-201ENST00000618696 141 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.61□□□□□ -1.99
CCDC136Q96JN2 RNU6-280P-201ENST00000364145 104 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 RNA5SP126-201ENST00000365092 109 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.387-201ENST00000383918 102 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 RNU1-139P-201ENST00000391307 165 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 SNORA75.6-201ENST00000391318 127 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.653-201ENST00000459091 95 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 RN7SL274P-201ENST00000492268 272 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 AC022493.2-201ENST00000506122 481 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 RNU6-856P-201ENST00000516959 98 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC136Q96JN2 AL773524.1-201ENST00000614065 229 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 AL359697.1-201ENST00000624879 587 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 AC112487.2-201ENST00000637950 304 ntBASIC2.6□□□□□ -1.99
CCDC136Q96JN2 MTND5P6-201ENST00000422338 1798 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 RNU1-62P-201ENST00000362599 164 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.259-201ENST00000364619 101 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 Y_RNA.263-201ENST00000364659 114 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 RNU6-793P-201ENST00000384233 104 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 RNA5SP212-201ENST00000391223 107 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 SNORA11.2-201ENST00000408318 127 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC060773.1-201ENST00000421698 310 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 RPL23AP6-201ENST00000446637 472 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC114982.1-201ENST00000469402 321 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC067942.3-201ENST00000512025 362 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC136Q96JN2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AP002770.2-201ENST00000543613 532 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC093023.1-201ENST00000547375 507 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AK6P2-201ENST00000549020 471 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC125232.2-201ENST00000592457 143 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 AC068205.3-201ENST00000636385 468 ntBASIC2.59□□□□□ -1.99
CCDC136Q96JN2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC136Q96JN2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC136Q96JN2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms