Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNU2-3P-201ENST00000410144 191 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC073910.1-201ENST00000445047 438 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 ART2BP-201ENST00000453501 499 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 SCARNA18-201ENST00000459004 134 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC010531.2-201ENST00000465012 153 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC117525.1-201ENST00000515228 503 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 RNU6-504P-201ENST00000516568 104 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPG11Q96JI7 MTND2P7-201ENST00000521337 640 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.56□□□□□ -2.5
SPG11Q96JI7 RPL21P9-201ENST00000556149 474 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AL358072.1-201ENST00000604156 575 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 Z99289.3-201ENST00000605586 594 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC122133.1-201ENST00000613964 233 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.56□□□□□ -2.5
SPG11Q96JI7 SNORD114-19-201ENST00000363072 75 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-650P-201ENST00000365658 111 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-364P-201ENST00000384387 107 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 MIR548L-201ENST00000408303 86 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC244250.2-201ENST00000418731 148 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RPS24P1-201ENST00000438550 371 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 USP9YP29-201ENST00000445112 563 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC079354.2-201ENST00000453523 154 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-180P-201ENST00000516697 61 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AL162424.1-201ENST00000602325 221 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU1-29P-201ENST00000606574 126 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC007684.1-201ENST00000609671 477 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-512P-201ENST00000364438 103 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-480P-201ENST00000384332 107 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-880P-201ENST00000384526 107 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNA5SP95-201ENST00000410319 137 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC245047.3-201ENST00000429428 127 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AL133217.1-201ENST00000450980 425 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 BTF3P15-201ENST00000455606 336 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC110760.3-202ENST00000515177 371 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-732P-201ENST00000516033 103 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-475P-201ENST00000516073 104 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 RNU6-927P-201ENST00000516199 100 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPG11Q96JI7 FGF7P1-201ENST00000582820 288 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AL020997.3-201ENST00000602843 359 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 SUMO2P14-201ENST00000604488 293 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AP002360.4-201ENST00000606980 481 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 AC092608.3-201ENST00000625017 386 ntBASIC-0.57□□□□□ -2.5
SPG11Q96JI7 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 RNU6-754P-201ENST00000391166 107 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MTCO3P41-201ENST00000414801 328 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AL953862.1-201ENST00000423016 168 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 DEFB130D-201ENST00000426866 237 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MTND1P14-201ENST00000427400 950 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MTND1P17-201ENST00000448961 204 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MTCO3P27-201ENST00000514397 196 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 DEFB130C-202ENST00000530001 230 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AP002004.2-201ENST00000531656 154 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC025678.1-201ENST00000567861 338 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC090617.3-201ENST00000573670 475 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MIR4275-201ENST00000636486 87 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC106754.1-201ENST00000562632 1513 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 RNU4-76P-201ENST00000364509 141 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 RNU4-16P-201ENST00000364737 141 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
SPG11Q96JI7 SNORD100-201ENST00000408573 76 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MLLT10P1-201ENST00000418346 262 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC013262.1-201ENST00000426710 252 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.58□□□□□ -2.5
SPG11Q96JI7 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC009902.1-201ENST00000519351 183 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 CR383656.4-201ENST00000546909 122 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPG11Q96JI7 MTND3P19-201ENST00000603825 345 ntBASIC-0.58□□□□□ -2.5
SPG11Q96JI7 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 RNU6-726P-201ENST00000364680 107 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 RNU6-637P-201ENST00000384050 107 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
SPG11Q96JI7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.59□□□□□ -2.5
SPG11Q96JI7 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.59□□□□□ -2.5
SPG11Q96JI7 FABP5P15-201ENST00000453566 214 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 RNU6-528P-201ENST00000516926 100 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SPG11Q96JI7 MIR4677-201ENST00000584153 80 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 MIR3925-201ENST00000584674 77 ntBASIC-0.59□□□□□ -2.5
SPG11Q96JI7 MIR6129-201ENST00000616087 109 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms