Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
VMP1Q96GC9 SNORD50.1-201ENST00000362987 71 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 Y_RNA.151-201ENST00000363566 112 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 SNORA4.2-201ENST00000365313 147 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 RNU6-245P-201ENST00000384020 107 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 MIR194-1-201ENST00000384892 85 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 MIR487A-201ENST00000385009 80 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 RNA5SP323-201ENST00000391094 133 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 SDAD1P3-201ENST00000427380 333 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 MTND1P1-201ENST00000445453 368 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.56□□□□□ -2.16
VMP1Q96GC9 HMGN1P12-201ENST00000499125 195 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.56□□□□□ -2.16
VMP1Q96GC9 Y_RNA.704-201ENST00000516851 102 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 RNU1-117P-201ENST00000517041 158 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 AC024995.1-201ENST00000523014 93 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 ZNF519P2-201ENST00000557032 169 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 MIR4769-201ENST00000584126 77 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 uc_338.5-201ENST00000611839 155 ntBASIC1.56□□□□□ -2.16
VMP1Q96GC9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VMP1Q96GC9 MIR26B-201ENST00000362251 77 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 RNU4-75P-201ENST00000364621 146 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 RNU6-534P-201ENST00000364877 106 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 Y_RNA.372-201ENST00000365599 102 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 RNU6-780P-201ENST00000391030 104 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC008134.1-201ENST00000420943 193 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AL358453.1-201ENST00000422522 250 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 TRBVA-201ENST00000498804 316 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC105313.1-201ENST00000509121 353 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.55□□□□□ -2.16
VMP1Q96GC9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AL160236.1-201ENST00000556317 195 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC097065.2-201ENST00000608159 533 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC092954.2-201ENST00000609103 430 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC006504.8-201ENST00000621046 635 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC008873.1-201ENST00000625051 138 ntBASIC1.55□□□□□ -2.16
VMP1Q96GC9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
VMP1Q96GC9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
VMP1Q96GC9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 RNU4-9P-201ENST00000364951 139 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 MIR32-201ENST00000384965 70 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 RNA5SP467-201ENST00000391274 118 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VMP1Q96GC9 Y_RNA.615-201ENST00000410769 117 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 EIF1P1-201ENST00000421436 341 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 MTCO2P30-201ENST00000503662 364 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 RNU6-237P-201ENST00000515985 71 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.54□□□□□ -2.16
VMP1Q96GC9 POLR3GP2-201ENST00000588366 668 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 SNORD11B-201ENST00000607707 90 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 AC099654.12-201ENST00000639868 649 ntBASIC1.54□□□□□ -2.16
VMP1Q96GC9 RNU6-1252P-201ENST00000363054 104 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 RNU6-1240P-201ENST00000365155 104 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 Y_RNA.517-201ENST00000384551 106 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 MIR150-201ENST00000385048 84 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 RNU6-908P-201ENST00000410160 94 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 AC016907.1-201ENST00000419483 435 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 SNX2P2-201ENST00000424553 323 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 Z82205.1-201ENST00000428456 297 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 DLGAP5P1-201ENST00000430307 464 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 AC079354.2-201ENST00000453523 154 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 RNU7-34P-201ENST00000459394 64 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 AL163195.1-201ENST00000496941 348 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 Y_RNA.665-201ENST00000516177 98 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 AC025647.1-201ENST00000517879 253 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 MTND1P5-201ENST00000517906 940 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 AC245505.1-201ENST00000556398 224 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.53□□□□□ -2.16
VMP1Q96GC9 Y_RNA.41-201ENST00000362646 102 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 SNORD115-8-201ENST00000363856 82 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 SNORD115-38-201ENST00000365037 82 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 Y_RNA.436-201ENST00000384097 102 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 RNU6-950P-201ENST00000384651 107 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 RNU6-95P-201ENST00000384697 107 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VMP1Q96GC9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.52□□□□□ -2.17
VMP1Q96GC9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.52□□□□□ -2.17
VMP1Q96GC9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.52□□□□□ -2.17
VMP1Q96GC9 RNU6-221P-201ENST00000459541 99 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 RNU1-142P-201ENST00000516682 145 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.52□□□□□ -2.17
VMP1Q96GC9 AL442163.3-201ENST00000554110 156 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 AC023043.2-201ENST00000589678 1026 ntBASIC1.52□□□□□ -2.17
VMP1Q96GC9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.52□□□□□ -2.17
VMP1Q96GC9 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 685 ms