Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AC009237.7-201ENST00000447357 229 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 SNORD11.1-201ENST00000459482 85 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 RPS29P27-201ENST00000463711 170 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 SNORA31.4-201ENST00000516049 129 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 Z99497.2-201ENST00000603634 310 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 AL513534.2-201ENST00000603836 250 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 Z84480.1-201ENST00000605131 311 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 RNU6-85P-201ENST00000605989 107 ntBASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.6□□□□□ -2.31
CCDC112Q8NEF3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 RNU6-505P-201ENST00000384427 107 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 SNORD12-201ENST00000391002 90 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 RPS3AP1-201ENST00000413190 320 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 RPS26P42-201ENST00000413485 326 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 MTCO3P8-201ENST00000453691 755 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 RNU7-167P-201ENST00000459160 62 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 RPL39P5-202ENST00000512505 151 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 SNORD79.1-201ENST00000516069 84 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AC069113.1-201ENST00000517763 267 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AL590705.4-201ENST00000532209 134 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AC026470.2-201ENST00000561492 181 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AL391840.1-201ENST00000571144 367 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 MIR3941-201ENST00000582572 103 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 BNIP3P39-201ENST00000601077 554 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AP001596.2-201ENST00000608410 312 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 MIR8054-201ENST00000620877 86 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AL359697.1-201ENST00000624879 587 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 AC010487.4-201ENST00000637027 61 ntBASIC0.59□□□□□ -2.31
CCDC112Q8NEF3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
CCDC112Q8NEF3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 RNA5SP361-201ENST00000362686 118 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 RNU4-41P-201ENST00000364426 143 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 RNU6-282P-201ENST00000365357 103 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 SNORA67.2-201ENST00000384300 149 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 MIR586-201ENST00000385035 97 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AF228730.1-201ENST00000397972 663 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 RNU6-584P-201ENST00000410350 95 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC245047.7-201ENST00000440265 293 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 RPS27P22-201ENST00000478056 241 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 RPS26P48-201ENST00000491713 339 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AL121579.1-201ENST00000555129 305 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC092354.1-201ENST00000606057 376 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC008133.2-201ENST00000624540 351 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AL589743.1-201ENST00000551932 2712 ntBASIC0.58□□□□□ -2.32
CCDC112Q8NEF3 AC023934.1-201ENST00000574529 2389 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 RNA5SP323-201ENST00000391094 133 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 RN7SKP200-201ENST00000410564 320 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 RNU6-57P-201ENST00000411348 103 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC005534.2-201ENST00000431047 433 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 RNU7-57P-201ENST00000459540 60 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC007215.1-201ENST00000464893 276 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC105417.1-201ENST00000514691 285 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 RNU6-922P-201ENST00000516753 99 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 RNU6-612P-201ENST00000516909 102 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 MIR1273G-201ENST00000577677 100 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC068790.2-201ENST00000602601 557 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AP000907.4-201ENST00000604143 237 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC005014.3-201ENST00000605985 190 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC097065.2-201ENST00000608159 533 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AP001506.1-201ENST00000615444 211 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 AC139792.3-201ENST00000623525 224 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.57□□□□□ -2.32
CCDC112Q8NEF3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 RNU6-606P-201ENST00000384721 111 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 SNORD73A-201ENST00000386062 65 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 SNORA40.3-201ENST00000390964 122 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 MIR1253-201ENST00000408273 105 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 RNU2-29P-201ENST00000410423 189 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 CETN4P-201ENST00000432407 469 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 AL033528.1-201ENST00000453780 140 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.56□□□□□ -2.32
CCDC112Q8NEF3 AC105758.1-201ENST00000506038 399 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 376.5 ms