Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RPL37P10-201ENST00000412884 288 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 RNA5SP57-201ENST00000459463 123 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 RPL31P58-201ENST00000469001 379 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AP000870.1-201ENST00000472927 406 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AC103851.1-201ENST00000506833 274 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 RNU6-948P-201ENST00000516374 107 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 SNORA25.14-201ENST00000516481 132 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 Y_RNA.691-201ENST00000516611 103 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AL355802.3-201ENST00000607571 545 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AC005014.2-201ENST00000607795 599 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 uc_338.5-201ENST00000611839 155 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 AC022306.2-201ENST00000617563 647 ntBASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC197Q8NCU1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 RNU1-62P-201ENST00000362599 164 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 RNU6-862P-201ENST00000362804 105 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 RNU6-112P-201ENST00000363599 104 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 MIR10B-201ENST00000385011 110 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 USMG5P1-201ENST00000425964 177 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 MTND3P23-201ENST00000431980 347 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 MTND3P10-201ENST00000450967 341 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AC116353.2-201ENST00000505332 712 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 YWHAEP4-201ENST00000505390 198 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 RNU1-117P-201ENST00000517041 158 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AP000889.1-201ENST00000530968 660 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 EIF4BP1-201ENST00000554881 351 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 HSBP1P1-201ENST00000555205 166 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AC005668.1-201ENST00000571142 476 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AC009229.3-201ENST00000608056 282 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AC013412.1-201ENST00000610687 192 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AL078596.1-201ENST00000624856 447 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AC068205.3-201ENST00000636385 468 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 AL136360.1-201ENST00000503377 1900 ntBASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC197Q8NCU1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 SNORA80A-201ENST00000363922 136 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RNU6-280P-201ENST00000364145 104 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RNU1-139P-201ENST00000391307 165 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AL033519.2-201ENST00000403958 392 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 NCOR1P3-201ENST00000420479 303 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AL356320.1-201ENST00000429616 163 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AC074290.1-201ENST00000448883 135 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RPL7P42-201ENST00000481005 679 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AC011406.1-201ENST00000512440 370 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AC008549.1-201ENST00000512900 643 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RNA5SP384-201ENST00000516615 116 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 SNORA20.3-201ENST00000516880 132 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 SNORA31.17-201ENST00000516953 127 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AC105029.1-201ENST00000520250 669 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 AC100812.1-201ENST00000607622 580 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 TPTEP1-208ENST00000636884 213 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
CCDC197Q8NCU1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 SNORD81.2-201ENST00000365153 76 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 Y_RNA.390-201ENST00000383932 102 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 RNA5SP213-201ENST00000391031 106 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 RNU4-14P-201ENST00000410858 122 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 AC245047.4-201ENST00000433189 144 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 RNU7-57P-201ENST00000459540 60 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 MTND4P17-201ENST00000470444 350 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 AC091179.3-201ENST00000474761 144 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 AK6P2-201ENST00000549020 471 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 AC069114.2-201ENST00000604699 304 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 MIR338-201ENST00000636369 67 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 AC099654.14-201ENST00000638599 341 ntBASIC1.6□□□□□ -2.15
CCDC197Q8NCU1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 AL356292.1-201ENST00000283110 373 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 RNU6-222P-201ENST00000362438 107 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 SNORD87-201ENST00000364849 89 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 SNORA11-201ENST00000408789 128 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 RNU6-57P-201ENST00000411348 103 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 RN7SKP101-201ENST00000411376 320 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 AC016909.1-201ENST00000415916 166 ntBASIC1.59□□□□□ -2.15
CCDC197Q8NCU1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms