Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC012557.2-201ENST00000605919 418 ntBASIC1.78□□□□□ -2.12
CCDC89Q8N998 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.78□□□□□ -2.12
CCDC89Q8N998 AL121890.5-201ENST00000620848 304 ntBASIC1.78□□□□□ -2.12
CCDC89Q8N998 AC095038.3-201ENST00000634439 195 ntBASIC1.78□□□□□ -2.12
CCDC89Q8N998 MTND5P35-201ENST00000557537 1720 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 RNU5F-3P-201ENST00000363767 117 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 Y_RNA.287-201ENST00000364853 94 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 AC097065.2-201ENST00000608159 533 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
CCDC89Q8N998 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC89Q8N998 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CCDC89Q8N998 RNU6-280P-201ENST00000364145 104 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 RNU6-534P-201ENST00000364877 106 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 AL513185.2-201ENST00000425543 193 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC89Q8N998 NDUFB4P10-201ENST00000452541 359 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 RPS29P21-201ENST00000496272 170 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 HMGN1P12-201ENST00000499125 195 ntBASIC1.76□□□□□ -2.13
CCDC89Q8N998 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC89Q8N998 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC89Q8N998 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.75□□□□□ -2.13
CCDC89Q8N998 SNORA33-201ENST00000363664 130 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 U3.8-201ENST00000363675 217 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNU6-203P-201ENST00000384038 104 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNU6-1013P-201ENST00000384180 107 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNU6-331P-201ENST00000384724 107 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNA5SP118-201ENST00000410385 109 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNA5SP504-201ENST00000410676 117 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 AC027119.1-201ENST00000440877 241 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 TRBV12-1-201ENST00000479785 344 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 RNU1-142P-201ENST00000516682 145 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC89Q8N998 AC027288.2-201ENST00000553028 243 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC89Q8N998 EIF1P4-201ENST00000572664 335 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 AC015688.6-201ENST00000577737 104 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 MIR5696-201ENST00000578474 85 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 MIR4273-201ENST00000582824 84 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 AC090617.10-201ENST00000624308 134 ntBASIC1.75□□□□□ -2.13
CCDC89Q8N998 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC89Q8N998 Y_RNA.450-201ENST00000384198 113 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 RNU6-17P-201ENST00000384245 107 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 RNU6-18P-201ENST00000384527 107 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 RNU6-950P-201ENST00000384651 107 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 MIR194-1-201ENST00000384892 85 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 RNA5SP467-201ENST00000391274 118 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 AC016909.1-201ENST00000415916 166 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 MTATP6P13-201ENST00000438531 667 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 RNU6-720P-201ENST00000516363 108 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC89Q8N998 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC89Q8N998 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC89Q8N998 AL161722.3-201ENST00000605789 2983 ntBASIC1.74□□□□□ -2.13
CCDC89Q8N998 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC89Q8N998 RNU6-873P-201ENST00000363833 107 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 SNORA4.2-201ENST00000365313 147 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 RNU6-596P-201ENST00000365395 98 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 Y_RNA.554-201ENST00000384672 102 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 RNU6-159P-201ENST00000391080 106 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 MRPL35P1-201ENST00000404272 572 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC89Q8N998 MTND4LP16-201ENST00000440828 295 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC89Q8N998 RPS26P45-201ENST00000471748 340 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 AL163195.1-201ENST00000496941 348 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 RNU7-175P-201ENST00000515915 61 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 RNU6-864P-201ENST00000516256 108 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 RNU6-1314P-201ENST00000517139 104 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 MIR3942-201ENST00000585264 109 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 AL359075.3-201ENST00000613288 217 ntBASIC1.73□□□□□ -2.13
CCDC89Q8N998 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC89Q8N998 Y_RNA.89-201ENST00000363031 102 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 Y_RNA.157-201ENST00000363638 102 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 RNU4-12P-201ENST00000365233 139 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 SNORA70B-201ENST00000384210 135 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 MIR1185-2-201ENST00000408687 86 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC89Q8N998 RPS29P23-201ENST00000458635 123 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 RN7SKP210-201ENST00000459176 261 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 RNU7-34P-201ENST00000459394 64 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 RPL30P10-201ENST00000488148 337 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 AC103851.1-201ENST00000506833 274 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC89Q8N998 AC134698.4-201ENST00000523451 826 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 TPRKBP2-201ENST00000565969 475 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 PRR13P7-201ENST00000605538 430 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 U4.5-201ENST00000617137 123 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 AC009248.2-201ENST00000619826 254 ntBASIC1.72□□□□□ -2.13
CCDC89Q8N998 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms