Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MIR4299-201ENST00000577899 72 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 MIR4753-201ENST00000585119 83 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 AL096840.1-201ENST00000603287 93 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 AL773524.1-201ENST00000614065 229 ntBASIC1.53□□□□□ -2.16
C9orf40Q8IXQ3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
C9orf40Q8IXQ3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC245060.5-201ENST00000610778 3293 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-845P-201ENST00000362578 103 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 RNU1-17P-201ENST00000363022 152 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 SNORD115-8-201ENST00000363856 82 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-593P-201ENST00000364716 112 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 SNORD115-38-201ENST00000365037 82 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.339-201ENST00000365325 102 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 SNORA8-201ENST00000384574 139 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-541P-201ENST00000384709 110 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 FGF7P8-201ENST00000402994 292 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 HMGB1P18-201ENST00000438801 619 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 RPL23AP6-201ENST00000446637 472 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC026782.1-201ENST00000512952 449 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-58P-201ENST00000517143 103 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AL590705.4-201ENST00000532209 134 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AC005034.5-201ENST00000604219 466 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 AL627230.6-201ENST00000611129 280 ntBASIC1.52□□□□□ -2.17
C9orf40Q8IXQ3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.48-201ENST00000362710 103 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-595P-201ENST00000363944 107 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-418P-201ENST00000384035 107 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-17P-201ENST00000384245 107 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.473-201ENST00000384333 102 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-18P-201ENST00000384527 107 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-601P-201ENST00000384540 107 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 SNORA48.1-201ENST00000390879 135 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNA5SP213-201ENST00000391031 106 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.594-201ENST00000410373 140 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RPL37P10-201ENST00000412884 288 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RPL21P111-201ENST00000418453 477 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AC244636.1-201ENST00000421152 228 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AL357134.1-201ENST00000445848 426 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RN7SKP210-201ENST00000459176 261 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNA5SP57-201ENST00000459463 123 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNU7-175P-201ENST00000515915 61 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 RNVU1-2-201ENST00000516326 135 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AC027288.2-201ENST00000553028 243 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AL109918.3-201ENST00000603072 338 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 AL159152.1-201ENST00000635019 2587 ntBASIC1.51□□□□□ -2.17
C9orf40Q8IXQ3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.2-201ENST00000362330 96 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.166-201ENST00000363730 102 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.184-201ENST00000363884 108 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 RNA5SP99-201ENST00000364020 114 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-245P-201ENST00000384020 107 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.490-201ENST00000384413 102 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-1050P-201ENST00000410388 107 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 PDCL2P1-201ENST00000419302 352 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 MTCO3P29-201ENST00000432119 779 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AL445305.1-201ENST00000432577 575 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 RBMX2P4-201ENST00000441256 376 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AC114982.1-201ENST00000469402 321 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AC067942.3-201ENST00000512025 362 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.670-201ENST00000516255 105 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 SNORA25.14-201ENST00000516481 132 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 SUMO2P18-201ENST00000518873 252 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 CBX3P8-201ENST00000532412 525 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 uc_338.5-201ENST00000611839 155 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AC083806.3-201ENST00000614016 455 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AL359757.2-201ENST00000624309 274 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AC022513.1-201ENST00000624512 117 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.88-201ENST00000363029 99 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-137P-201ENST00000363680 108 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 RNU6-873P-201ENST00000363833 107 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 Y_RNA.482-201ENST00000384377 111 ntBASIC1.49□□□□□ -2.17
C9orf40Q8IXQ3 MIR586-201ENST00000385035 97 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms