Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MTCO3P8-201ENST00000453691 755 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 RNU6-1213P-201ENST00000517075 94 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AL590705.4-201ENST00000532209 134 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AL121579.1-201ENST00000555129 305 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AC026470.2-201ENST00000561492 181 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AC104581.2-201ENST00000572227 430 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 MIR548S-201ENST00000581352 82 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AC016727.1-205ENST00000605437 569 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 AC091932.3-201ENST00000624223 323 ntBASIC1.89□□□□□ -2.11
CCDC60Q8IWA6 RNU6-545P-201ENST00000362681 104 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.142-201ENST00000363491 102 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU6-595P-201ENST00000363944 107 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 SNORD115-32-201ENST00000364079 82 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU6-1164P-201ENST00000364428 107 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.319-201ENST00000365138 92 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU6-541P-201ENST00000384709 110 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU6-331P-201ENST00000384724 107 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 MIR597-201ENST00000384968 97 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 MIR153-2-201ENST00000385225 87 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 SNORA40.19-201ENST00000390846 128 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 SNORA12.2-201ENST00000391040 156 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU6-370P-201ENST00000411008 104 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RPL23AP50-201ENST00000434149 455 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU7-175P-201ENST00000515915 61 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RNA5SP384-201ENST00000516615 116 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 AC105029.1-201ENST00000520250 669 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 CBX3P4-201ENST00000538909 354 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 UBE2V2P2-201ENST00000587677 504 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RPL17P51-201ENST00000605218 238 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 RMST_6.1-201ENST00000611980 203 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 AL359314.1-201ENST00000616913 261 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 AC130454.1-201ENST00000622948 401 ntBASIC1.88□□□□□ -2.11
CCDC60Q8IWA6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 MTND4P12-201ENST00000498999 1377 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AC245060.5-201ENST00000610778 3293 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 SNORD31B-201ENST00000364977 69 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.332-201ENST00000365271 113 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.404-201ENST00000383978 102 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.405-201ENST00000383979 100 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.451-201ENST00000384200 100 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.524-201ENST00000384564 100 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 Y_RNA.561-201ENST00000384694 100 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 SNORA75.4-201ENST00000391278 119 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 MIR320B2-201ENST00000408479 138 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AC004866.1-201ENST00000411748 78 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 NCOR1P3-201ENST00000420479 303 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AC108667.1-201ENST00000428618 249 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 RN7SKP210-201ENST00000459176 261 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 RNA5SP458-201ENST00000516188 119 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 SNRPGP20-201ENST00000604477 205 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 TCL6_2.1-201ENST00000615162 119 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AC005296.1-201ENST00000616145 209 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AL590240.4-201ENST00000616908 390 ntBASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC60Q8IWA6 RNU6-23P-201ENST00000363283 107 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC123900.1-201ENST00000420390 96 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 MTND4P18-201ENST00000447010 465 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC007215.1-201ENST00000464893 276 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC091951.2-201ENST00000500762 203 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 SCARNA16.2-201ENST00000516520 172 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 RNU6-58P-201ENST00000517143 103 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 GNAI2P1-201ENST00000541815 315 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AP001094.1-201ENST00000579805 193 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC005014.2-201ENST00000607795 599 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 AL669831.3-213ENST00000636676 183 ntBASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
CCDC60Q8IWA6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms