Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 DPRXP1-201ENST00000426312 460 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 AL133396.1-201ENST00000432048 687 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 AC119618.1-201ENST00000434191 222 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 BTF3P15-201ENST00000455606 336 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 RNU6-274P-201ENST00000459566 107 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 AC021146.6-201ENST00000514659 117 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 RNA5SP66-201ENST00000517178 101 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 AC021231.3-201ENST00000558497 370 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 MIR3115-201ENST00000577915 68 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 MIR3152-201ENST00000579801 74 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 AC006441.5-201ENST00000612680 209 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 MIR8054-201ENST00000620877 86 ntBASIC-1.01□□□□□ -2.57
CDC42BPAQ5VT25 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 MIR204-201ENST00000385200 110 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 MIR501-201ENST00000390204 84 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AL139824.2-201ENST00000458731 1095 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 RNU6-63P-201ENST00000516690 95 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 RNU6-706P-201ENST00000517229 104 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 RNA5SP169-201ENST00000517268 117 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AC091163.3-201ENST00000518269 1144 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AC040926.1-201ENST00000530195 238 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AC093023.1-201ENST00000547375 507 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AC133485.4-201ENST00000561835 220 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AC006380.1-201ENST00000603598 186 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 AL390208.1-201ENST00000605885 644 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 MIR7107-201ENST00000611489 80 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 U4.2-201ENST00000618561 85 ntBASIC-1.02□□□□□ -2.57
CDC42BPAQ5VT25 MIR301A-201ENST00000385261 86 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 RNU6-440P-201ENST00000390882 105 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 MTCO2P23-201ENST00000425216 680 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 SNORD111.1-201ENST00000516421 86 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 AL118556.2-201ENST00000614375 824 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 uc_338.19-201ENST00000616808 99 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 AP000484.1-201ENST00000620067 1252 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 FRG1KP-201ENST00000623592 341 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 AC092608.3-201ENST00000625017 386 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 SNORD38B-202ENST00000625943 69 ntBASIC-1.03□□□□□ -2.57
CDC42BPAQ5VT25 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 RNU4-36P-201ENST00000364294 144 ntBASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 RNA5SP467-201ENST00000391274 118 ntBASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AL133264.1-201ENST00000407157 562 ntBASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AL392103.1-201ENST00000447000 198 ntBASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.03□□□□□ -2.58
CDC42BPAQ5VT25 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 RNU6-40P-201ENST00000384254 107 ntBASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 MTND3P4-201ENST00000453537 303 ntBASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 AC121334.2-201ENST00000605387 271 ntBASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 MIR6828-201ENST00000636181 60 ntBASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.04□□□□□ -2.58
CDC42BPAQ5VT25 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 MIR148A-201ENST00000362215 68 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 snoZ40.1-201ENST00000364540 72 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 RNU6-878P-201ENST00000384578 110 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 RNU6-705P-201ENST00000410601 104 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AC006366.1-201ENST00000422002 759 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 RPS24P1-201ENST00000438550 371 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 RNA5SP216-201ENST00000516111 123 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 DEFB130C-202ENST00000530001 230 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AP002004.2-201ENST00000531656 154 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AL162424.1-201ENST00000602325 221 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AP002802.2-201ENST00000605877 235 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AL139286.2-201ENST00000606838 396 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 AC093726.3-201ENST00000637588 150 ntBASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.05□□□□□ -2.58
CDC42BPAQ5VT25 SNORA75.1-201ENST00000391130 148 ntBASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 SNORA12-201ENST00000391162 147 ntBASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 POLR2KP2-201ENST00000438155 177 ntBASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 AL500527.2-201ENST00000454105 95 ntBASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 RNU1-29P-201ENST00000606574 126 ntBASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 AL159153.1-201ENST00000619688 317 ntBASIC-1.06□□□□□ -2.58
CDC42BPAQ5VT25 AC134878.1-201ENST00000619901 243 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms