Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC090960.1-201ENST00000421072 306 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 AL590632.1-201ENST00000424289 371 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 MED13P1-201ENST00000428342 171 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 HMGN2P26-201ENST00000463169 339 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 RN7SKP164-201ENST00000516138 266 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 RNU7-128P-201ENST00000517247 62 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 OR8K2P-201ENST00000524645 927 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 AC005176.2-201ENST00000596933 147 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 AL136221.1-201ENST00000621449 509 ntBASIC-0.61□□□□□ -2.51
CCDC58Q4VC31 MIR520G-201ENST00000385064 90 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 MIR520H-201ENST00000385126 88 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 MIR548H2-201ENST00000408874 88 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 MTND4P15-201ENST00000437913 1033 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 MTND2P30-201ENST00000456663 382 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 RNU7-94P-201ENST00000459576 63 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 RNU2-10P-201ENST00000516375 211 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 AC105185.1-201ENST00000518705 535 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 ADI1P3-201ENST00000549509 470 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 RBM11P1-201ENST00000604951 799 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 AC024060.1-201ENST00000607052 494 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 uc_338.6-201ENST00000613544 171 ntBASIC-0.62□□□□□ -2.51
CCDC58Q4VC31 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 RNA5SP94-201ENST00000516917 108 ntBASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 RNA5SP330-201ENST00000517096 96 ntBASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 AL158211.1-201ENST00000566763 763 ntBASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 AC007684.1-201ENST00000609671 477 ntBASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 MIR2909-201ENST00000617113 69 ntBASIC-0.63□□□□□ -2.51
CCDC58Q4VC31 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 SNORA75.6-201ENST00000391318 127 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 RNA5SP127-201ENST00000411051 133 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC006366.1-201ENST00000422002 759 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC074290.1-201ENST00000448883 135 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC010486.2-201ENST00000505572 483 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 RNU6-377P-201ENST00000515965 102 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 RNU7-12P-201ENST00000516030 62 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 MIR548AO-201ENST00000579992 96 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AL117336.2-201ENST00000602435 335 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 AC012409.4-201ENST00000612923 249 ntBASIC-0.64□□□□□ -2.51
CCDC58Q4VC31 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 RNA5SP325-201ENST00000363756 130 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 RNU6-371P-201ENST00000364283 108 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 SNORA8.2-201ENST00000384372 139 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 MIR643-201ENST00000385267 97 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 MTND4LP16-201ENST00000440828 295 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 RNA5SP216-201ENST00000516111 123 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 AC144521.1-201ENST00000607148 956 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 AC093875.1-201ENST00000623688 504 ntBASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.65□□□□□ -2.51
CCDC58Q4VC31 SNORD114-31-201ENST00000363219 75 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 RNU6-336P-201ENST00000364891 107 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 MTND1P32-201ENST00000433043 938 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 snoU13.21-201ENST00000459368 105 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 AC104692.1-201ENST00000472406 90 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 TRBVB-201ENST00000477100 408 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 AC079395.1-201ENST00000510981 262 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 RNU11-2P-201ENST00000516898 142 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 MIR4645-201ENST00000583158 77 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 MIR4743-201ENST00000584576 69 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 AC006157.1-201ENST00000611750 366 ntBASIC-0.66□□□□□ -2.52
CCDC58Q4VC31 SNORD114-28-201ENST00000363610 72 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 RNU4-41P-201ENST00000364426 143 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 MIR526A1-201ENST00000384897 85 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 RNU6-127P-201ENST00000390897 107 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 PCNPP3-201ENST00000393579 471 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 RNU2-3P-201ENST00000410144 191 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 AC008134.1-201ENST00000420943 193 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 MRPS10P2-201ENST00000431226 381 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 RNU6-123P-201ENST00000516163 102 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 IGLVI-20-201ENST00000519296 130 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 MIR5692A1-201ENST00000580523 69 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 AC005562.2-201ENST00000618264 111 ntBASIC-0.67□□□□□ -2.52
CCDC58Q4VC31 RNU6-369P-201ENST00000362515 102 ntBASIC-0.68□□□□□ -2.52
CCDC58Q4VC31 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 522.7 ms