Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 MIR340-201ENST00000362125 95 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.86-201ENST00000363020 111 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AC009161.1-201ENST00000417306 376 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AC123900.1-201ENST00000420390 96 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AC004386.2-201ENST00000441858 148 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AL035666.1-201ENST00000446195 348 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 RPS29P29-201ENST00000456396 171 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 RPL23AP75-201ENST00000491601 451 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 RNU4-49P-201ENST00000516080 140 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 RNU1-92P-201ENST00000517017 135 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 MIR3169-201ENST00000578032 83 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 MIR5006-201ENST00000583027 110 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 AC098679.4-201ENST00000624241 654 ntBASIC1.7□□□□□ -2.14
SHROOM1Q2M3G4 MIR126-201ENST00000362291 85 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-1059P-201ENST00000363752 98 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-418P-201ENST00000384035 107 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-784P-201ENST00000384330 106 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 SNORA48.1-201ENST00000390879 135 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 FCF1P9-201ENST00000412546 282 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 NCOR1P3-201ENST00000420479 303 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 MTCO3P8-201ENST00000453691 755 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 MTCO2P30-201ENST00000503662 364 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHROOM1Q2M3G4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.135-201ENST00000363439 95 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-392P-201ENST00000364926 101 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-192P-201ENST00000391253 100 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 MIR1277-201ENST00000408536 78 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-864P-201ENST00000516256 108 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 AC124303.1-201ENST00000605703 360 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 MIR6128-201ENST00000615528 109 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 AC005562.2-201ENST00000618264 111 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 AL133216.2-202ENST00000634512 349 ntBASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SHROOM1Q2M3G4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.48-201ENST00000362710 103 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 RNU1-76P-201ENST00000362903 159 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 SNORD31B-201ENST00000364977 69 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.473-201ENST00000384333 102 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 MIR32-201ENST00000384965 70 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 RN7SKP51-201ENST00000410781 304 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 AC004866.1-201ENST00000411748 78 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 MTND4LP16-201ENST00000440828 295 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 AC079354.2-201ENST00000453523 154 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 AC025465.3-201ENST00000510570 311 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 ACA59.1-201ENST00000515966 143 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.682-201ENST00000516457 100 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-566P-201ENST00000516790 107 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 AC016256.1-201ENST00000547971 354 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 AC002553.4-201ENST00000616896 331 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 MIR7111-201ENST00000619751 72 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 ZNF204P-201ENST00000416749 2397 ntBASIC1.67□□□□□ -2.14
SHROOM1Q2M3G4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 Y_RNA.157-201ENST00000363638 102 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-338P-201ENST00000383888 105 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 EIF1P1-201ENST00000421436 341 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AL357134.1-201ENST00000445848 426 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC016717.1-201ENST00000448918 286 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC010531.2-201ENST00000465012 153 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 RNA5SP454-201ENST00000517231 127 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC083806.3-201ENST00000614016 455 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AL157834.3-201ENST00000615543 103 ntBASIC1.66□□□□□ -2.14
SHROOM1Q2M3G4 AC009248.2-201ENST00000619826 254 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms