Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.75□□□□□ -2.29
FOXF1Q12946 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.75□□□□□ -2.29
FOXF1Q12946 AC091435.1-201ENST00000505442 584 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AC104383.1-201ENST00000530297 370 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AL157687.1-201ENST00000554853 619 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.75□□□□□ -2.29
FOXF1Q12946 AC136443.5-201ENST00000603741 370 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 SNRPGP20-201ENST00000604477 205 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AC007684.1-201ENST00000609671 477 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 MIR8076-201ENST00000611401 83 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.75□□□□□ -2.29
FOXF1Q12946 AC126177.8-201ENST00000618339 1015 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 AC012676.2-201ENST00000619258 186 ntBASIC0.75□□□□□ -2.29
FOXF1Q12946 RNU6-1123P-201ENST00000362347 106 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 Y_RNA.167-201ENST00000363735 109 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 SNORA67.2-201ENST00000384300 149 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 RNY3P9-201ENST00000384727 106 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 RNU11-5P-201ENST00000391216 129 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 EIF4E2P1-201ENST00000393781 255 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 MIR320B2-201ENST00000408479 138 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 RNU4-55P-201ENST00000410731 137 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AL663109.1-201ENST00000411498 844 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.74□□□□□ -2.29
FOXF1Q12946 HMGN2P34-201ENST00000437647 269 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 snoU13.6-201ENST00000458785 104 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 BET1P1-201ENST00000482276 359 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 MTCO1P29-201ENST00000496868 288 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AL163195.1-201ENST00000496941 348 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.74□□□□□ -2.29
FOXF1Q12946 RPL39P5-202ENST00000512505 151 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 SNORA19.2-201ENST00000516013 114 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AC019176.1-201ENST00000518519 225 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.74□□□□□ -2.29
FOXF1Q12946 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.74□□□□□ -2.29
FOXF1Q12946 AC007834.2-201ENST00000536310 343 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.74□□□□□ -2.29
FOXF1Q12946 MIR4742-201ENST00000581069 85 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 MIR5006-201ENST00000583027 110 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 AC092747.3-201ENST00000603769 301 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.74□□□□□ -2.29
FOXF1Q12946 MIR6504-201ENST00000613520 61 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 MIR8065-201ENST00000620577 100 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 FER-210ENST00000628534 558 ntTSL 5 BASIC0.74□□□□□ -2.29
FOXF1Q12946 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
FOXF1Q12946 AC245060.5-201ENST00000610778 3293 ntBASIC0.74□□□□□ -2.29
FOXF1Q12946 RNA5SP327-201ENST00000362494 101 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-1317P-201ENST00000364582 104 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 Y_RNA.296-201ENST00000364930 108 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 SNORD114-22-201ENST00000365423 72 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-245P-201ENST00000384020 107 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-968P-201ENST00000384076 107 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-214P-201ENST00000384130 107 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 CALM2P3-201ENST00000400429 449 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-648P-201ENST00000410190 107 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC004866.1-201ENST00000411748 78 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 COX6CP10-201ENST00000416832 224 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.73□□□□□ -2.29
FOXF1Q12946 AC008134.1-201ENST00000420943 193 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 SNX2P2-201ENST00000424553 323 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 USP9YP14-201ENST00000430663 563 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 PGBD4P5-201ENST00000445958 426 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.73□□□□□ -2.29
FOXF1Q12946 NDUFB4P10-201ENST00000452541 359 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RPS26P45-201ENST00000471748 340 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AF186996.7-201ENST00000492781 209 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC103851.1-201ENST00000506833 274 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU7-40P-201ENST00000516397 64 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNA5SP54-201ENST00000516951 92 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.73□□□□□ -2.29
FOXF1Q12946 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.73□□□□□ -2.29
FOXF1Q12946 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.73□□□□□ -2.29
FOXF1Q12946 AL118558.2-201ENST00000556294 238 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.73□□□□□ -2.29
FOXF1Q12946 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.73□□□□□ -2.29
FOXF1Q12946 MIR4709-201ENST00000577272 72 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AP000907.4-201ENST00000604143 237 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC004492.1-201ENST00000607036 742 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.73□□□□□ -2.29
FOXF1Q12946 FAM157A-202ENST00000615155 405 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC073534.2-201ENST00000620377 381 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AP000770.2-201ENST00000623694 100 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 AC099654.5-201ENST00000636479 350 ntBASIC0.73□□□□□ -2.29
FOXF1Q12946 RNU6-137P-201ENST00000363680 108 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 RNU4-20P-201ENST00000365601 151 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 Y_RNA.378-201ENST00000365652 113 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 RNU6-128P-201ENST00000383976 107 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 MTND3P9-201ENST00000429526 346 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.72□□□□□ -2.29
FOXF1Q12946 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.72□□□□□ -2.29
FOXF1Q12946 MTCO3P8-201ENST00000453691 755 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 RNU6-221P-201ENST00000459541 99 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.72□□□□□ -2.29
FOXF1Q12946 AL133373.1-201ENST00000497098 94 ntBASIC0.72□□□□□ -2.29
FOXF1Q12946 AC092436.3-201ENST00000511788 257 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms