Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 SNORD3E-202ENST00000627253 216 ntBASIC0.6□□□□□ -2.31
GTF2BQ00403 AL442644.1-201ENST00000454390 3105 ntBASIC0.6□□□□□ -2.31
GTF2BQ00403 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
GTF2BQ00403 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
GTF2BQ00403 RNU5B-2P-201ENST00000363036 113 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 RNU6-456P-201ENST00000384493 107 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 MIR605-201ENST00000385078 83 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 RNU6-1106P-201ENST00000390845 107 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 SNORA12.1-201ENST00000390873 148 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 SNORA40.3-201ENST00000390964 122 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 RNA5SP494-201ENST00000410653 129 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.59□□□□□ -2.31
GTF2BQ00403 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.59□□□□□ -2.31
GTF2BQ00403 AC245047.3-201ENST00000429428 127 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AC007215.1-201ENST00000464893 276 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AC136628.3-201ENST00000521868 290 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 MIR5583-1-201ENST00000580941 59 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 BNIP3P39-201ENST00000601077 554 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AC068790.6-201ENST00000602558 258 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 GHRLOS.1-201ENST00000610995 70 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 U2.17-201ENST00000611454 95 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AL359075.3-201ENST00000613288 217 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AP001506.1-201ENST00000615444 211 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 RMST_2.1-201ENST00000617263 136 ntBASIC0.59□□□□□ -2.31
GTF2BQ00403 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU6-227P-201ENST00000362865 103 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU4-76P-201ENST00000364509 141 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU6-282P-201ENST00000365357 103 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 Y_RNA.354-201ENST00000365448 111 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 Y_RNA.508-201ENST00000384502 114 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 Y_RNA.560-201ENST00000384689 102 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU6-606P-201ENST00000384721 111 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 MIR653-201ENST00000385279 96 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AF228730.1-201ENST00000397972 663 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 MIR942-201ENST00000401111 86 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU2-29P-201ENST00000410423 189 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 CETN4P-201ENST00000432407 469 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.58□□□□□ -2.32
GTF2BQ00403 MTND2P39-201ENST00000457230 764 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AC022364.2-201ENST00000457963 554 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 snoU13.18-201ENST00000459483 104 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RPS29P27-201ENST00000463711 170 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 HMGB1P29-201ENST00000505659 499 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU6-322P-201ENST00000516010 103 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 MTND2P32-201ENST00000521584 1038 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.58□□□□□ -2.32
GTF2BQ00403 AC022432.1-201ENST00000595739 310 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.58□□□□□ -2.32
GTF2BQ00403 AC068790.2-201ENST00000602601 557 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AC080078.2-201ENST00000603766 501 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.58□□□□□ -2.32
GTF2BQ00403 AC068792.1-201ENST00000621354 417 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 AL513423.1-201ENST00000621695 132 ntBASIC0.58□□□□□ -2.32
GTF2BQ00403 RNU1-133P-201ENST00000364867 167 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 SNORA67.2-201ENST00000384300 149 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 RNU6-440P-201ENST00000390882 105 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 RNU2-9P-201ENST00000410194 145 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.57□□□□□ -2.32
GTF2BQ00403 MTND3P9-201ENST00000429526 346 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.57□□□□□ -2.32
GTF2BQ00403 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.57□□□□□ -2.32
GTF2BQ00403 AC025465.4-201ENST00000513422 638 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AC010493.1-201ENST00000513479 292 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.57□□□□□ -2.32
GTF2BQ00403 RNU6-947P-201ENST00000516264 106 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AC025647.1-201ENST00000517879 253 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.57□□□□□ -2.32
GTF2BQ00403 MIR4778-201ENST00000577635 80 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AC245014.2-201ENST00000603689 287 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AC246785.4-201ENST00000605374 287 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 AL078596.1-201ENST00000624856 447 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 snoZ196.1-201ENST00000625269 89 ntBASIC0.57□□□□□ -2.32
GTF2BQ00403 RNA5SP361-201ENST00000362686 118 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 Y_RNA.796-201ENST00000364268 102 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 Y_RNA.799-201ENST00000364992 102 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 Y_RNA.355-201ENST00000365462 98 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 RNU6-969P-201ENST00000383900 105 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 SNORD41-201ENST00000386967 70 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 AL034345.1-201ENST00000407768 123 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 RNU6-584P-201ENST00000410350 95 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 RPS26P5-201ENST00000418544 335 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.56□□□□□ -2.32
GTF2BQ00403 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.56□□□□□ -2.32
GTF2BQ00403 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.56□□□□□ -2.32
GTF2BQ00403 AL033528.1-201ENST00000453780 140 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 AC106038.2-201ENST00000520706 568 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 AP002963.1-201ENST00000530590 184 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 AL137161.1-201ENST00000532231 390 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.56□□□□□ -2.32
GTF2BQ00403 AC004584.2-201ENST00000570407 410 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 RMST_3.1-201ENST00000611651 109 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 MTND4P5-201ENST00000435821 1374 ntBASIC0.56□□□□□ -2.32
GTF2BQ00403 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
GTF2BQ00403 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
GTF2BQ00403 SNORA80D-201ENST00000384488 135 ntBASIC0.55□□□□□ -2.32
GTF2BQ00403 MIR660-201ENST00000385235 97 ntBASIC0.55□□□□□ -2.32
GTF2BQ00403 MRPL42P3-201ENST00000401492 326 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms