Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MTCO3P29-201ENST00000432119 779 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 MTND3P21-201ENST00000433774 331 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 HMGN2P34-201ENST00000437647 269 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 TRBVA-201ENST00000498804 316 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 MTCYBP18-201ENST00000501056 747 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 MTCO2P30-201ENST00000503662 364 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 RNU6-314P-201ENST00000516574 104 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 RNU6-256P-201ENST00000516747 97 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.28□□□□□ -2.2
PKNOX1P55347 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.28□□□□□ -2.2
PKNOX1P55347 SNRPGP20-201ENST00000604477 205 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 AC137590.2-201ENST00000619709 240 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.28□□□□□ -2.2
PKNOX1P55347 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
PKNOX1P55347 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 SNORD115-8-201ENST00000363856 82 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 SNORD115-38-201ENST00000365037 82 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 Y_RNA.436-201ENST00000384097 102 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 RPL30P13-201ENST00000418873 348 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AL353572.1-201ENST00000442490 417 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 PCMTD1P1-201ENST00000455560 355 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.27□□□□□ -2.21
PKNOX1P55347 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AC114982.1-201ENST00000469402 321 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 RPL36AP21-201ENST00000490372 323 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.27□□□□□ -2.21
PKNOX1P55347 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
PKNOX1P55347 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.27□□□□□ -2.21
PKNOX1P55347 RNU6-344P-201ENST00000516635 111 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 RNU6-548P-201ENST00000517083 115 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 MTND1P5-201ENST00000517906 940 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.27□□□□□ -2.21
PKNOX1P55347 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.27□□□□□ -2.21
PKNOX1P55347 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 AC006001.4-201ENST00000622243 395 ntBASIC1.27□□□□□ -2.21
PKNOX1P55347 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PKNOX1P55347 Y_RNA.212-201ENST00000364177 102 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 Y_RNA.287-201ENST00000364853 94 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 SNORA4.2-201ENST00000365313 147 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 MIR517A-201ENST00000385001 87 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 ZNF885P-201ENST00000420174 1098 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 DAP3P1-201ENST00000441522 278 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 AC010095.1-201ENST00000443543 144 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 AC073910.1-201ENST00000445047 438 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RNU7-57P-201ENST00000459540 60 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RPS26P55-201ENST00000471178 356 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RN7SL429P-201ENST00000479090 223 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RN7SL489P-201ENST00000486185 223 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RN7SL327P-201ENST00000488659 223 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RNA5SP481-201ENST00000516814 122 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 AP003033.1-201ENST00000527244 415 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.26□□□□□ -2.21
PKNOX1P55347 AP003465.2-201ENST00000602571 373 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 AC015540.1-201ENST00000615828 501 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 RN7SL853P-201ENST00000617250 223 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 MIR7843-201ENST00000622274 79 ntBASIC1.26□□□□□ -2.21
PKNOX1P55347 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
PKNOX1P55347 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
PKNOX1P55347 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 SNORD115-32-201ENST00000364079 82 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 RNU4-9P-201ENST00000364951 139 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 SNORD1A-201ENST00000364968 72 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 Y_RNA.414-201ENST00000384011 101 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 RNU6-57P-201ENST00000411348 103 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.25□□□□□ -2.21
PKNOX1P55347 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.25□□□□□ -2.21
PKNOX1P55347 RNU1-117P-201ENST00000517041 158 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 AC109635.3-201ENST00000529536 185 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.25□□□□□ -2.21
PKNOX1P55347 SUB1P3-201ENST00000564581 315 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 MIR4742-201ENST00000581069 85 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 MIR3942-201ENST00000585264 109 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 POLR3GP2-201ENST00000588366 668 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 AL050343.2-201ENST00000607338 280 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 MIR8063-201ENST00000621930 81 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 AC090617.10-201ENST00000624308 134 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 ICE2P2-201ENST00000483823 2787 ntBASIC1.25□□□□□ -2.21
PKNOX1P55347 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 Y_RNA.100-201ENST00000363141 102 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 Y_RNA.554-201ENST00000384672 102 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 RNU6-417P-201ENST00000384712 107 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 RNU6-331P-201ENST00000384724 107 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 MIR194-1-201ENST00000384892 85 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 MIR32-201ENST00000384965 70 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 MIR181A1-201ENST00000385026 110 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.24□□□□□ -2.21
PKNOX1P55347 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.24□□□□□ -2.21
PKNOX1P55347 AL121890.1-201ENST00000435457 205 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 AC069257.2-201ENST00000441819 155 ntBASIC1.24□□□□□ -2.21
PKNOX1P55347 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.24□□□□□ -2.21
PKNOX1P55347 snoU13.27-201ENST00000459278 104 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms