Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC074290.1-201ENST00000448883 135 ntBASIC1.11□□□□□ -2.23
ACLYP53396 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.11□□□□□ -2.23
ACLYP53396 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.11□□□□□ -2.23
ACLYP53396 TPTE2P5-203ENST00000458118 728 ntBASIC1.11□□□□□ -2.23
ACLYP53396 RPS26P45-201ENST00000471748 340 ntBASIC1.11□□□□□ -2.23
ACLYP53396 RNU6-1146P-201ENST00000516282 102 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.11□□□□□ -2.23
ACLYP53396 CENPUP1-201ENST00000526649 1202 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.11□□□□□ -2.23
ACLYP53396 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AC025423.5-201ENST00000550230 219 ntBASIC1.11□□□□□ -2.23
ACLYP53396 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AC011712.1-201ENST00000588959 234 ntBASIC1.11□□□□□ -2.23
ACLYP53396 Z99497.2-201ENST00000603634 310 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AP000907.4-201ENST00000604143 237 ntBASIC1.11□□□□□ -2.23
ACLYP53396 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.11□□□□□ -2.23
ACLYP53396 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AL355802.3-201ENST00000607571 545 ntBASIC1.11□□□□□ -2.23
ACLYP53396 MIR6857-201ENST00000613267 93 ntBASIC1.11□□□□□ -2.23
ACLYP53396 AC040896.1-201ENST00000613819 479 ntBASIC1.11□□□□□ -2.23
ACLYP53396 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.11□□□□□ -2.23
ACLYP53396 AC103705.1-201ENST00000619013 241 ntBASIC1.11□□□□□ -2.23
ACLYP53396 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.11□□□□□ -2.23
ACLYP53396 FER-210ENST00000628534 558 ntTSL 5 BASIC1.11□□□□□ -2.23
ACLYP53396 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
ACLYP53396 Y_RNA.123-201ENST00000363338 102 ntBASIC1.1□□□□□ -2.23
ACLYP53396 RNU6-82P-201ENST00000363970 107 ntBASIC1.1□□□□□ -2.23
ACLYP53396 Y_RNA.205-201ENST00000364128 113 ntBASIC1.1□□□□□ -2.23
ACLYP53396 RNU6-1329P-201ENST00000365664 107 ntBASIC1.1□□□□□ -2.23
ACLYP53396 RNU6-968P-201ENST00000384076 107 ntBASIC1.1□□□□□ -2.23
ACLYP53396 RNU6-1105P-201ENST00000384774 107 ntBASIC1.1□□□□□ -2.23
ACLYP53396 MIR549A-201ENST00000385268 96 ntBASIC1.1□□□□□ -2.23
ACLYP53396 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ACLYP53396 AL353193.1-201ENST00000421444 268 ntBASIC1.1□□□□□ -2.23
ACLYP53396 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.1□□□□□ -2.23
ACLYP53396 MTCO3P8-201ENST00000453691 755 ntBASIC1.1□□□□□ -2.23
ACLYP53396 MTCO3P38-201ENST00000468910 766 ntBASIC1.1□□□□□ -2.23
ACLYP53396 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.1□□□□□ -2.23
ACLYP53396 AL163195.1-201ENST00000496941 348 ntBASIC1.1□□□□□ -2.23
ACLYP53396 RNU6-1069P-201ENST00000516612 133 ntBASIC1.1□□□□□ -2.23
ACLYP53396 Y_RNA.695-201ENST00000516715 107 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.1□□□□□ -2.23
ACLYP53396 SCOCP1-201ENST00000554676 349 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AC073648.5-201ENST00000603502 305 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AC092747.3-201ENST00000603769 301 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AC009509.4-201ENST00000619202 509 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AC006001.4-201ENST00000622243 395 ntBASIC1.1□□□□□ -2.23
ACLYP53396 AC009033.1-201ENST00000624279 431 ntBASIC1.1□□□□□ -2.23
ACLYP53396 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
ACLYP53396 Y_RNA.381-201ENST00000365666 102 ntBASIC1.09□□□□□ -2.23
ACLYP53396 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
ACLYP53396 MIR586-201ENST00000385035 97 ntBASIC1.09□□□□□ -2.23
ACLYP53396 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
ACLYP53396 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
ACLYP53396 AL049545.1-201ENST00000401856 572 ntBASIC1.09□□□□□ -2.23
ACLYP53396 AC092447.3-201ENST00000426027 686 ntBASIC1.09□□□□□ -2.23
ACLYP53396 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.09□□□□□ -2.23
ACLYP53396 RPS27P1-201ENST00000450552 247 ntBASIC1.09□□□□□ -2.23
ACLYP53396 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.09□□□□□ -2.23
ACLYP53396 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.09□□□□□ -2.23
ACLYP53396 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
ACLYP53396 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.09□□□□□ -2.23
ACLYP53396 AL357078.3-201ENST00000607528 618 ntBASIC1.09□□□□□ -2.23
ACLYP53396 AC139792.3-201ENST00000623525 224 ntBASIC1.09□□□□□ -2.23
ACLYP53396 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
ACLYP53396 MTND4P5-201ENST00000435821 1374 ntBASIC1.08□□□□□ -2.24
ACLYP53396 RNU6-417P-201ENST00000384712 107 ntBASIC1.08□□□□□ -2.24
ACLYP53396 SNORD37.1-201ENST00000390968 65 ntBASIC1.08□□□□□ -2.24
ACLYP53396 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
ACLYP53396 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.08□□□□□ -2.24
ACLYP53396 AL445305.1-201ENST00000432577 575 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AL606489.2-201ENST00000433886 234 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AC007215.1-201ENST00000464893 276 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AF186996.7-201ENST00000492781 209 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
ACLYP53396 HMGN1P12-201ENST00000499125 195 ntBASIC1.08□□□□□ -2.24
ACLYP53396 HMGB1P29-201ENST00000505659 499 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.08□□□□□ -2.24
ACLYP53396 SNORA40.12-201ENST00000516329 111 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AC024995.1-201ENST00000523014 93 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ACLYP53396 MRPS36P4-201ENST00000534436 298 ntBASIC1.08□□□□□ -2.24
ACLYP53396 MIR4742-201ENST00000581069 85 ntBASIC1.08□□□□□ -2.24
ACLYP53396 FGF7P1-201ENST00000582820 288 ntBASIC1.08□□□□□ -2.24
ACLYP53396 MZT1P2-201ENST00000604387 248 ntBASIC1.08□□□□□ -2.24
ACLYP53396 SNRPGP20-201ENST00000604477 205 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AC007684.1-201ENST00000609671 477 ntBASIC1.08□□□□□ -2.24
ACLYP53396 RMST_3.1-201ENST00000611651 109 ntBASIC1.08□□□□□ -2.24
ACLYP53396 AL158063.1-201ENST00000615349 536 ntBASIC1.08□□□□□ -2.24
ACLYP53396 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
ACLYP53396 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
ACLYP53396 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ACLYP53396 Y_RNA.1-201ENST00000352915 104 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RNU6-1123P-201ENST00000362347 106 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RNU6-1305P-201ENST00000364353 104 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RNU1-133P-201ENST00000364867 167 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RNA5SP259-201ENST00000365541 109 ntBASIC1.07□□□□□ -2.24
ACLYP53396 SNORA75-201ENST00000384158 137 ntBASIC1.07□□□□□ -2.24
ACLYP53396 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms