Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 UBL5P3-201ENST00000475112 231 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 AC022616.8-201ENST00000533569 253 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 EIF4A1P12-201ENST00000551910 141 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 MIR4658-201ENST00000584344 65 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 MIR219B-201ENST00000637023 88 ntBASIC2.35□□□□□ -2.03
CLCN3P51790 RNU6-1159P-201ENST00000362933 107 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 RNU6-944P-201ENST00000364023 107 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 RNY3P11-201ENST00000364153 102 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 RNU6-546P-201ENST00000383991 107 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 MIR568-201ENST00000385036 95 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 RNU6-700P-201ENST00000391043 107 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CLCN3P51790 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AC007098.1-201ENST00000420122 367 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AC009238.1-201ENST00000442165 424 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AC009237.6-201ENST00000446969 424 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 snoU13.30-201ENST00000458951 104 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.34□□□□□ -2.03
CLCN3P51790 AC022616.4-201ENST00000522985 181 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.34□□□□□ -2.03
CLCN3P51790 VN1R91P-201ENST00000594377 169 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 7SK.7-201ENST00000603504 247 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AC016727.2-201ENST00000603988 621 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 RMST_6.1-201ENST00000611980 203 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AL138825.1-201ENST00000618587 192 ntBASIC2.34□□□□□ -2.03
CLCN3P51790 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLCN3P51790 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLCN3P51790 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.34□□□□□ -2.04
CLCN3P51790 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLCN3P51790 MTND5P16-201ENST00000460269 1703 ntBASIC2.34□□□□□ -2.04
CLCN3P51790 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CLCN3P51790 RNU1-23P-201ENST00000363361 144 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 SNORD115-8-201ENST00000363856 82 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 SNORD115-38-201ENST00000365037 82 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 MIR504-201ENST00000385065 83 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 MIR1294-201ENST00000408503 142 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 OR2AQ1P-201ENST00000451972 200 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 AC010655.3-201ENST00000478818 450 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 Y_RNA.721-201ENST00000517207 102 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.33□□□□□ -2.04
CLCN3P51790 AC100812.1-201ENST00000607622 580 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 AL021879.1-201ENST00000611756 288 ntBASIC2.33□□□□□ -2.04
CLCN3P51790 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.33□□□□□ -2.04
CLCN3P51790 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLCN3P51790 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
CLCN3P51790 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLCN3P51790 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLCN3P51790 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 Y_RNA.380-201ENST00000365663 111 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 Y_RNA.459-201ENST00000384251 102 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 RNU1-139P-201ENST00000391307 165 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 MIR208B-201ENST00000401172 77 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 RNU6-101P-201ENST00000410323 104 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 RNU2-32P-201ENST00000411193 191 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 AC096644.2-201ENST00000429278 159 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 AC092423.1-201ENST00000430165 186 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCN3P51790 U8.22-201ENST00000459141 133 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 AC087477.1-201ENST00000465747 340 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 AC018868.1-201ENST00000491307 315 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 RNU7-175P-201ENST00000515915 61 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 AC144568.1-201ENST00000520139 137 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 NDUFA5P6-201ENST00000542110 379 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLCN3P51790 AC027288.2-201ENST00000553028 243 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.32□□□□□ -2.04
CLCN3P51790 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.32□□□□□ -2.04
CLCN3P51790 U2.1-201ENST00000618978 145 ntBASIC2.32□□□□□ -2.04
CLCN3P51790 RNU6-137P-201ENST00000363680 108 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 RNU6-611P-201ENST00000384276 104 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 RNU6-378P-201ENST00000384324 107 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CLCN3P51790 SNORA69.1-201ENST00000390904 137 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 MIR1252-201ENST00000408861 65 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 RNU2-2P-201ENST00000410396 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
CLCN3P51790 MTCYBP9-201ENST00000431021 303 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLCN3P51790 FCF1P4-201ENST00000448326 183 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 AC007215.1-201ENST00000464893 276 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 MTCO2P24-201ENST00000515611 426 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 HSPE1P18-201ENST00000517602 280 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 AC040926.1-201ENST00000530195 238 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 CYCSP26-201ENST00000534107 320 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 AC006600.1-201ENST00000572529 153 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 AL355297.3-201ENST00000604082 446 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 PRR13P7-201ENST00000605538 430 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.15-201ENST00000611544 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.16-201ENST00000613119 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.12-201ENST00000613778 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.20-201ENST00000613956 192 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.9-201ENST00000615427 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.11-201ENST00000616345 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.2-201ENST00000616535 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 AL132822.1-201ENST00000617063 513 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.3-201ENST00000617785 191 ntBASIC2.31□□□□□ -2.04
CLCN3P51790 U2.19-201ENST00000618602 191 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms