Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU5F-8P-201ENST00000515941 111 ntBASIC2.86□□□□□ -1.95
CLK3P49761 RNU6-191P-201ENST00000516295 94 ntBASIC2.86□□□□□ -1.95
CLK3P49761 SNORA31.23-201ENST00000517219 133 ntBASIC2.86□□□□□ -1.95
CLK3P49761 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.86□□□□□ -1.95
CLK3P49761 AC007179.3-201ENST00000604976 235 ntBASIC2.86□□□□□ -1.95
CLK3P49761 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
CLK3P49761 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.86□□□□□ -1.95
CLK3P49761 RBBP8P1-201ENST00000449447 1844 ntBASIC2.86□□□□□ -1.95
CLK3P49761 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.86□□□□□ -1.95
CLK3P49761 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.86□□□□□ -1.95
CLK3P49761 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
CLK3P49761 Y_RNA.272-201ENST00000364696 102 ntBASIC2.85□□□□□ -1.95
CLK3P49761 RNU4-56P-201ENST00000364700 142 ntBASIC2.85□□□□□ -1.95
CLK3P49761 SNORA72.2-201ENST00000365028 127 ntBASIC2.85□□□□□ -1.95
CLK3P49761 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.85□□□□□ -1.95
CLK3P49761 RNU6-211P-201ENST00000384047 107 ntBASIC2.85□□□□□ -1.95
CLK3P49761 SNORA26.3-201ENST00000391119 136 ntBASIC2.85□□□□□ -1.95
CLK3P49761 AL357139.1-201ENST00000407792 426 ntBASIC2.85□□□□□ -1.95
CLK3P49761 RNU2-51P-201ENST00000410708 197 ntBASIC2.85□□□□□ -1.95
CLK3P49761 RNU5E-9P-201ENST00000411164 104 ntBASIC2.85□□□□□ -1.95
CLK3P49761 AC138623.1-201ENST00000418060 216 ntBASIC2.85□□□□□ -1.95
CLK3P49761 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.85□□□□□ -1.95
CLK3P49761 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
CLK3P49761 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.85□□□□□ -1.95
CLK3P49761 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.85□□□□□ -1.95
CLK3P49761 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.85□□□□□ -1.95
CLK3P49761 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.85□□□□□ -1.95
CLK3P49761 AC055872.1-201ENST00000570978 278 ntBASIC2.85□□□□□ -1.95
CLK3P49761 AC096577.2-201ENST00000611455 153 ntBASIC2.85□□□□□ -1.95
CLK3P49761 snoU18.1-201ENST00000629629 71 ntBASIC2.85□□□□□ -1.95
CLK3P49761 MIR3529-201ENST00000637713 78 ntBASIC2.85□□□□□ -1.95
CLK3P49761 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLK3P49761 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
CLK3P49761 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.85□□□□□ -1.95
CLK3P49761 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLK3P49761 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLK3P49761 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.85□□□□□ -1.95
CLK3P49761 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLK3P49761 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLK3P49761 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.84□□□□□ -1.95
CLK3P49761 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLK3P49761 Y_RNA.343-201ENST00000365354 112 ntBASIC2.84□□□□□ -1.95
CLK3P49761 SNORD116-18-201ENST00000383961 92 ntBASIC2.84□□□□□ -1.95
CLK3P49761 RNU6-22P-201ENST00000384355 107 ntBASIC2.84□□□□□ -1.95
CLK3P49761 Y_RNA.571-201ENST00000384753 98 ntBASIC2.84□□□□□ -1.95
CLK3P49761 AC012306.1-201ENST00000423267 114 ntBASIC2.84□□□□□ -1.95
CLK3P49761 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.84□□□□□ -1.95
CLK3P49761 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.84□□□□□ -1.95
CLK3P49761 BX510359.1-201ENST00000456973 237 ntBASIC2.84□□□□□ -1.95
CLK3P49761 snoU13.6-201ENST00000458785 104 ntBASIC2.84□□□□□ -1.95
CLK3P49761 RNU6-625P-201ENST00000459412 107 ntBASIC2.84□□□□□ -1.95
CLK3P49761 RPL31P41-201ENST00000477967 372 ntBASIC2.84□□□□□ -1.95
CLK3P49761 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.84□□□□□ -1.95
CLK3P49761 RNU6-479P-201ENST00000516348 105 ntBASIC2.84□□□□□ -1.95
CLK3P49761 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.84□□□□□ -1.95
CLK3P49761 AC018448.1-201ENST00000552843 316 ntBASIC2.84□□□□□ -1.95
CLK3P49761 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.84□□□□□ -1.95
CLK3P49761 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.84□□□□□ -1.95
CLK3P49761 MIR5195-201ENST00000583555 115 ntBASIC2.84□□□□□ -1.95
CLK3P49761 UBL5P2-201ENST00000583788 219 ntBASIC2.84□□□□□ -1.95
CLK3P49761 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.84□□□□□ -1.95
CLK3P49761 MTND5P35-201ENST00000557537 1720 ntBASIC2.84□□□□□ -1.96
CLK3P49761 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLK3P49761 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
CLK3P49761 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.83□□□□□ -1.96
CLK3P49761 RNU4-80P-201ENST00000363200 141 ntBASIC2.83□□□□□ -1.96
CLK3P49761 Y_RNA.179-201ENST00000363844 90 ntBASIC2.83□□□□□ -1.96
CLK3P49761 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNU6-312P-201ENST00000364629 107 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNU6-1130P-201ENST00000365434 107 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNU6-959P-201ENST00000384671 107 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNU6-1248P-201ENST00000391096 64 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNA5SP390-201ENST00000410191 113 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AC022018.1-201ENST00000430685 241 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RPS29P6-201ENST00000438196 145 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AC007215.1-201ENST00000464893 276 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AL121594.1-201ENST00000475906 575 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RN7SL633P-201ENST00000488974 297 ntBASIC2.83□□□□□ -1.96
CLK3P49761 HMGB3P3-201ENST00000510526 400 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNU6-966P-201ENST00000516479 104 ntBASIC2.83□□□□□ -1.96
CLK3P49761 RNU6-62P-201ENST00000516526 102 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.83□□□□□ -1.96
CLK3P49761 AC107016.2-201ENST00000547968 190 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AC011471.1-201ENST00000585766 187 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.83□□□□□ -1.96
CLK3P49761 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
CLK3P49761 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.83□□□□□ -1.96
CLK3P49761 AC092593.1-201ENST00000515413 1815 ntBASIC2.83□□□□□ -1.96
CLK3P49761 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
CLK3P49761 MIR22-201ENST00000362190 85 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RNU6-1272P-201ENST00000362776 107 ntBASIC2.82□□□□□ -1.96
CLK3P49761 Y_RNA.101-201ENST00000363154 102 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RNU6-1285P-201ENST00000363480 105 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RNU6-449P-201ENST00000383914 107 ntBASIC2.82□□□□□ -1.96
CLK3P49761 Y_RNA.400-201ENST00000383963 111 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RNU6-245P-201ENST00000384020 107 ntBASIC2.82□□□□□ -1.96
CLK3P49761 RNU6-1310P-201ENST00000384153 107 ntBASIC2.82□□□□□ -1.96
CLK3P49761 Y_RNA.497-201ENST00000384447 98 ntBASIC2.82□□□□□ -1.96
CLK3P49761 Y_RNA.498-201ENST00000384460 102 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms