Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RPL23AP75-201ENST00000491601 451 ntBASIC2.16□□□□□ -2.06
CLK1P49759 MTCO2P24-201ENST00000515611 426 ntBASIC2.16□□□□□ -2.06
CLK1P49759 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
CLK1P49759 AC006600.1-201ENST00000572529 153 ntBASIC2.16□□□□□ -2.06
CLK1P49759 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.16□□□□□ -2.06
CLK1P49759 AL078605.1-201ENST00000603529 500 ntBASIC2.16□□□□□ -2.06
CLK1P49759 AP000560.1-201ENST00000624150 1937 ntBASIC2.15□□□□□ -2.06
CLK1P49759 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CLK1P49759 RNU6-212P-201ENST00000362642 104 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RNU5B-2P-201ENST00000363036 113 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RNU6-1285P-201ENST00000363480 105 ntBASIC2.15□□□□□ -2.07
CLK1P49759 Y_RNA.389-201ENST00000383924 113 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RNU6-968P-201ENST00000384076 107 ntBASIC2.15□□□□□ -2.07
CLK1P49759 MIR544A-201ENST00000384855 91 ntBASIC2.15□□□□□ -2.07
CLK1P49759 MIR190B-201ENST00000401119 79 ntBASIC2.15□□□□□ -2.07
CLK1P49759 CBX3P9-201ENST00000402326 552 ntBASIC2.15□□□□□ -2.07
CLK1P49759 MTCYBP2-201ENST00000407745 171 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RNU6-1140P-201ENST00000410517 106 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RN7SKP61-201ENST00000410642 295 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RNU6-1245P-201ENST00000411130 106 ntBASIC2.15□□□□□ -2.07
CLK1P49759 SRIP3-201ENST00000413200 219 ntBASIC2.15□□□□□ -2.07
CLK1P49759 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLK1P49759 AC007098.1-201ENST00000420122 367 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.15□□□□□ -2.07
CLK1P49759 RNU7-169P-201ENST00000459456 61 ntBASIC2.15□□□□□ -2.07
CLK1P49759 RNA5SP57-201ENST00000459463 123 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AL121594.1-201ENST00000475906 575 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.15□□□□□ -2.07
CLK1P49759 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.15□□□□□ -2.07
CLK1P49759 Y_RNA.721-201ENST00000517207 102 ntBASIC2.15□□□□□ -2.07
CLK1P49759 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC022616.4-201ENST00000522985 181 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC040926.1-201ENST00000530195 238 ntBASIC2.15□□□□□ -2.07
CLK1P49759 HSBP1P1-201ENST00000555205 166 ntBASIC2.15□□□□□ -2.07
CLK1P49759 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.15□□□□□ -2.07
CLK1P49759 VN1R91P-201ENST00000594377 169 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AP000942.4-201ENST00000604811 241 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AL356157.2-201ENST00000605122 111 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.07
CLK1P49759 U2.1-201ENST00000618978 145 ntBASIC2.15□□□□□ -2.07
CLK1P49759 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.15□□□□□ -2.07
CLK1P49759 AC002543.1-201ENST00000299783 1954 ntBASIC2.15□□□□□ -2.07
CLK1P49759 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLK1P49759 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLK1P49759 Y_RNA.111-201ENST00000363248 100 ntBASIC2.14□□□□□ -2.07
CLK1P49759 RNU6-1141P-201ENST00000364520 107 ntBASIC2.14□□□□□ -2.07
CLK1P49759 RNU4-9P-201ENST00000364951 139 ntBASIC2.14□□□□□ -2.07
CLK1P49759 SNORD14.1-201ENST00000365609 90 ntBASIC2.14□□□□□ -2.07
CLK1P49759 SNORA29-201ENST00000384183 140 ntBASIC2.14□□□□□ -2.07
CLK1P49759 RNU6-708P-201ENST00000384217 107 ntBASIC2.14□□□□□ -2.07
CLK1P49759 SNORA36A-201ENST00000384221 132 ntBASIC2.14□□□□□ -2.07
CLK1P49759 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
CLK1P49759 RNU6-1274P-201ENST00000384557 107 ntBASIC2.14□□□□□ -2.07
CLK1P49759 SNORA26.3-201ENST00000391119 136 ntBASIC2.14□□□□□ -2.07
CLK1P49759 MIR1252-201ENST00000408861 65 ntBASIC2.14□□□□□ -2.07
CLK1P49759 EIF1AXP1-201ENST00000419267 435 ntBASIC2.14□□□□□ -2.07
CLK1P49759 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CLK1P49759 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
CLK1P49759 OR2AQ1P-201ENST00000451972 200 ntBASIC2.14□□□□□ -2.07
CLK1P49759 U8.22-201ENST00000459141 133 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AC093852.1-201ENST00000503587 266 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AC234781.5-201ENST00000508429 271 ntBASIC2.14□□□□□ -2.07
CLK1P49759 RNU6-911P-201ENST00000516523 104 ntBASIC2.14□□□□□ -2.07
CLK1P49759 Y_RNA.715-201ENST00000517082 110 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AC021269.2-201ENST00000532318 330 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.14□□□□□ -2.07
CLK1P49759 MIR4503-201ENST00000582187 83 ntBASIC2.14□□□□□ -2.07
CLK1P49759 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
CLK1P49759 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AC016727.2-201ENST00000603988 621 ntBASIC2.14□□□□□ -2.07
CLK1P49759 Z98751.3-201ENST00000604447 521 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AL021879.1-201ENST00000611756 288 ntBASIC2.14□□□□□ -2.07
CLK1P49759 AL138825.1-201ENST00000618587 192 ntBASIC2.14□□□□□ -2.07
CLK1P49759 7SK.10-201ENST00000621414 298 ntBASIC2.14□□□□□ -2.07
CLK1P49759 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CLK1P49759 SNORD115-32-201ENST00000364079 82 ntBASIC2.13□□□□□ -2.07
CLK1P49759 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
CLK1P49759 RNU6-17P-201ENST00000384245 107 ntBASIC2.13□□□□□ -2.07
CLK1P49759 U8.10-201ENST00000384260 133 ntBASIC2.13□□□□□ -2.07
CLK1P49759 RNU6-18P-201ENST00000384527 107 ntBASIC2.13□□□□□ -2.07
CLK1P49759 RNU6-1222P-201ENST00000384615 107 ntBASIC2.13□□□□□ -2.07
CLK1P49759 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CLK1P49759 SNORA69.1-201ENST00000390904 137 ntBASIC2.13□□□□□ -2.07
CLK1P49759 RNU6-101P-201ENST00000410323 104 ntBASIC2.13□□□□□ -2.07
CLK1P49759 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.13□□□□□ -2.07
CLK1P49759 AL590556.1-201ENST00000423231 483 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.13□□□□□ -2.07
CLK1P49759 snoU13.30-201ENST00000458951 104 ntBASIC2.13□□□□□ -2.07
CLK1P49759 snoU13.14-201ENST00000459372 104 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
CLK1P49759 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
CLK1P49759 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.13□□□□□ -2.07
CLK1P49759 AC144568.1-201ENST00000520139 137 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
CLK1P49759 AP002770.2-201ENST00000543613 532 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AC016256.1-201ENST00000547971 354 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AC008269.2-201ENST00000561915 1105 ntBASIC2.13□□□□□ -2.07
CLK1P49759 AL355297.3-201ENST00000604082 446 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms