Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.19□□□□□ -2.22
CX3CR1P49238 AC023043.2-201ENST00000589678 1026 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AC097065.2-201ENST00000608159 533 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 AC005562.2-201ENST00000618264 111 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 MTND4P5-201ENST00000435821 1374 ntBASIC1.19□□□□□ -2.22
CX3CR1P49238 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CX3CR1P49238 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CX3CR1P49238 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CX3CR1P49238 RNU6-562P-201ENST00000362731 107 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 SNORA63D-201ENST00000364359 132 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 SNORA67.2-201ENST00000384300 149 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 RNA5SP504-201ENST00000410676 117 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 Z82205.1-201ENST00000428456 297 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 MTCO3P29-201ENST00000432119 779 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 AC007215.1-201ENST00000464893 276 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.18□□□□□ -2.22
CX3CR1P49238 RNA5SP384-201ENST00000516615 116 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 RNU6-256P-201ENST00000516747 97 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 RNU6-1088P-201ENST00000516850 104 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 RNU6-856P-201ENST00000516959 98 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 RNU1-92P-201ENST00000517017 135 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.18□□□□□ -2.22
CX3CR1P49238 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CX3CR1P49238 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.18□□□□□ -2.22
CX3CR1P49238 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 MIR4303-201ENST00000581299 66 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.18□□□□□ -2.22
CX3CR1P49238 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 SCARNA4-201ENST00000629045 128 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.18□□□□□ -2.22
CX3CR1P49238 ZNF72P-201ENST00000425869 1908 ntBASIC1.18□□□□□ -2.22
CX3CR1P49238 Y_RNA.100-201ENST00000363141 102 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 RNY4P14-201ENST00000363656 96 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 RNU6-534P-201ENST00000364877 106 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 Y_RNA.450-201ENST00000384198 113 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 MIR181A1-201ENST00000385026 110 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 MIR548F1-201ENST00000408667 84 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 MTND3P21-201ENST00000433774 331 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.17□□□□□ -2.22
CX3CR1P49238 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.17□□□□□ -2.22
CX3CR1P49238 AC067942.3-201ENST00000512025 362 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 AC011406.1-201ENST00000512440 370 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 AC109635.3-201ENST00000529536 185 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.17□□□□□ -2.22
CX3CR1P49238 AC008269.2-201ENST00000561915 1105 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 MIR5006-201ENST00000583027 110 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 MIR7843-201ENST00000622274 79 ntBASIC1.17□□□□□ -2.22
CX3CR1P49238 ZNF209P-201ENST00000593450 2304 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 MTND5P35-201ENST00000557537 1720 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 RNU1-17P-201ENST00000363022 152 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 Y_RNA.89-201ENST00000363031 102 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 Y_RNA.402-201ENST00000383972 102 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 Y_RNA.414-201ENST00000384011 101 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 Y_RNA.530-201ENST00000384587 101 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 RNU6-306P-201ENST00000384617 107 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 MIR1283-1-201ENST00000408494 87 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 AL445305.1-201ENST00000432577 575 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.16□□□□□ -2.22
CX3CR1P49238 TRBVA-201ENST00000498804 316 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 MTCO2P30-201ENST00000503662 364 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.16□□□□□ -2.22
CX3CR1P49238 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.16□□□□□ -2.22
CX3CR1P49238 RRN3P3-201ENST00000549207 578 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 AL161670.1-201ENST00000554348 137 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 AP000907.4-201ENST00000604143 237 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 AC090517.2-201ENST00000614966 680 ntBASIC1.16□□□□□ -2.22
CX3CR1P49238 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.22
CX3CR1P49238 RNU6-623P-201ENST00000363143 105 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 RNU6-128P-201ENST00000383976 107 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 RNU6-831P-201ENST00000384548 107 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 MIR517A-201ENST00000385001 87 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 MIR300-201ENST00000401138 83 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.15□□□□□ -2.23
CX3CR1P49238 AC016909.1-201ENST00000415916 166 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 ZNF885P-201ENST00000420174 1098 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.15□□□□□ -2.23
CX3CR1P49238 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.15□□□□□ -2.23
CX3CR1P49238 AL591806.2-201ENST00000433122 173 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
CX3CR1P49238 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 AC009237.7-201ENST00000447357 229 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 RNU1-123P-201ENST00000458950 160 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 RPL30P10-201ENST00000488148 337 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 RNU6-273P-201ENST00000516937 96 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 RNU6-1314P-201ENST00000517139 104 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 AK6P2-201ENST00000549020 471 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 AC012557.2-201ENST00000605919 418 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 TCL6_2.1-201ENST00000615162 119 ntBASIC1.15□□□□□ -2.23
CX3CR1P49238 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.15□□□□□ -2.23
CX3CR1P49238 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.15□□□□□ -2.23
CX3CR1P49238 BX322639.1-202ENST00000423987 2213 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms