Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 RNU4-62P-201ENST00000410125 130 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 HSPE1P9-201ENST00000440046 311 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 MTCO3P18-201ENST00000440206 761 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC009237.7-201ENST00000447357 229 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 RN7SKP210-201ENST00000459176 261 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 RPL36AP21-201ENST00000490372 323 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC011406.1-201ENST00000512440 370 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 RNA5SP437-201ENST00000517249 129 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 RAB11AP2-201ENST00000545905 639 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC084364.2-201ENST00000546924 395 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC005668.1-201ENST00000571142 476 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 MIR3672-201ENST00000584290 82 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 MIR4753-201ENST00000585119 83 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC069114.2-201ENST00000604699 304 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 SCARNA4-201ENST00000629045 128 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC024614.3-201ENST00000637860 256 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
CSNK1A1P48729 AC010615.1-201ENST00000594254 1764 ntBASIC1.18□□□□□ -2.22
CSNK1A1P48729 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CSNK1A1P48729 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.17□□□□□ -2.22
CSNK1A1P48729 RNU1-96P-201ENST00000364163 162 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 RNU6-975P-201ENST00000384296 105 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 SNORA67.2-201ENST00000384300 149 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CSNK1A1P48729 RNU6-482P-201ENST00000391068 107 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 AC108667.1-201ENST00000428618 249 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 NFU1P2-201ENST00000448700 469 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 MTCYBP18-201ENST00000501056 747 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CSNK1A1P48729 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.17□□□□□ -2.22
CSNK1A1P48729 AC023043.2-201ENST00000589678 1026 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 MIR338-201ENST00000636369 67 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 ICE2P2-201ENST00000483823 2787 ntBASIC1.17□□□□□ -2.22
CSNK1A1P48729 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.16□□□□□ -2.22
CSNK1A1P48729 SNORA63D-201ENST00000364359 132 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 RNU6-1019P-201ENST00000364424 107 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 Y_RNA.530-201ENST00000384587 101 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 Y_RNA.554-201ENST00000384672 102 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 MIR548B-201ENST00000385247 97 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
CSNK1A1P48729 MTND3P21-201ENST00000433774 331 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 Z82188.1-201ENST00000436709 154 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 AL353572.1-201ENST00000442490 417 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 PCMTD1P1-201ENST00000455560 355 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.16□□□□□ -2.22
CSNK1A1P48729 RPL30P7-201ENST00000479312 323 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 RNU6-948P-201ENST00000516374 107 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 RNU6-256P-201ENST00000516747 97 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 RNA5SP481-201ENST00000516814 122 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.16□□□□□ -2.22
CSNK1A1P48729 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.16□□□□□ -2.22
CSNK1A1P48729 AL353149.1-201ENST00000610667 244 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 AC015540.1-201ENST00000615828 501 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 AC095038.3-201ENST00000634439 195 ntBASIC1.16□□□□□ -2.22
CSNK1A1P48729 ZNF204P-201ENST00000416749 2397 ntBASIC1.15□□□□□ -2.22
CSNK1A1P48729 Y_RNA.135-201ENST00000363439 95 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 Y_RNA.140-201ENST00000363474 103 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 RNU6-790P-201ENST00000384479 105 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 RNU6-1235P-201ENST00000384559 107 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 ZNF885P-201ENST00000420174 1098 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 Z82205.1-201ENST00000428456 297 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 AL589823.1-201ENST00000429577 183 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 AC027119.1-201ENST00000440877 241 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.15□□□□□ -2.23
CSNK1A1P48729 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 RNU6-498P-201ENST00000459468 107 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 MTCO2P30-201ENST00000503662 364 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.15□□□□□ -2.23
CSNK1A1P48729 RNU2-34P-201ENST00000516534 121 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 AP003033.1-201ENST00000527244 415 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.15□□□□□ -2.23
CSNK1A1P48729 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.15□□□□□ -2.23
CSNK1A1P48729 SNRPGP20-201ENST00000604477 205 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.15□□□□□ -2.23
CSNK1A1P48729 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 MTND4P5-201ENST00000435821 1374 ntBASIC1.15□□□□□ -2.23
CSNK1A1P48729 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.15□□□□□ -2.23
CSNK1A1P48729 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CSNK1A1P48729 SNORA33-201ENST00000363664 130 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 Y_RNA.212-201ENST00000364177 102 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 RNU6-1305P-201ENST00000364353 104 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 MIR181A1-201ENST00000385026 110 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 MIR586-201ENST00000385035 97 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 CST2P1-201ENST00000425770 87 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
CSNK1A1P48729 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 TRBVA-201ENST00000498804 316 ntBASIC1.14□□□□□ -2.23
CSNK1A1P48729 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms