Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PGBD4P5-201ENST00000445958 426 ntBASIC0.96□□□□□ -2.26
RFC3P40938 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.96□□□□□ -2.26
RFC3P40938 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.96□□□□□ -2.26
RFC3P40938 LRRC34P1-201ENST00000542742 915 ntBASIC0.96□□□□□ -2.26
RFC3P40938 FAM106DP-201ENST00000586416 501 ntBASIC0.96□□□□□ -2.26
RFC3P40938 AC087752.4-201ENST00000605911 462 ntBASIC0.96□□□□□ -2.26
RFC3P40938 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
RFC3P40938 AC006001.4-201ENST00000622243 395 ntBASIC0.96□□□□□ -2.26
RFC3P40938 FER-210ENST00000628534 558 ntTSL 5 BASIC0.96□□□□□ -2.26
RFC3P40938 Y_RNA.123-201ENST00000363338 102 ntBASIC0.95□□□□□ -2.26
RFC3P40938 RNU6-1305P-201ENST00000364353 104 ntBASIC0.95□□□□□ -2.26
RFC3P40938 USP9YP29-201ENST00000445112 563 ntBASIC0.95□□□□□ -2.26
RFC3P40938 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.95□□□□□ -2.26
RFC3P40938 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
RFC3P40938 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
RFC3P40938 AC104576.1-201ENST00000524225 88 ntBASIC0.95□□□□□ -2.26
RFC3P40938 CENPUP1-201ENST00000526649 1202 ntBASIC0.95□□□□□ -2.26
RFC3P40938 MRPS36P4-201ENST00000534436 298 ntBASIC0.95□□□□□ -2.26
RFC3P40938 AC025423.5-201ENST00000550230 219 ntBASIC0.95□□□□□ -2.26
RFC3P40938 SNORA4-201ENST00000584302 138 ntBASIC0.95□□□□□ -2.26
RFC3P40938 RMST_3.1-201ENST00000611651 109 ntBASIC0.95□□□□□ -2.26
RFC3P40938 MIR6734-201ENST00000621166 68 ntBASIC0.95□□□□□ -2.26
RFC3P40938 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.95□□□□□ -2.26
RFC3P40938 SNORA67.2-201ENST00000384300 149 ntBASIC0.94□□□□□ -2.26
RFC3P40938 RNY1P14-201ENST00000384426 108 ntBASIC0.94□□□□□ -2.26
RFC3P40938 RNA5SP109-201ENST00000391010 116 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AL049545.1-201ENST00000401856 572 ntBASIC0.94□□□□□ -2.26
RFC3P40938 MIR1253-201ENST00000408273 105 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AL353193.1-201ENST00000421444 268 ntBASIC0.94□□□□□ -2.26
RFC3P40938 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.94□□□□□ -2.26
RFC3P40938 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.94□□□□□ -2.26
RFC3P40938 RPS27P1-201ENST00000450552 247 ntBASIC0.94□□□□□ -2.26
RFC3P40938 RNU7-57P-201ENST00000459540 60 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AF186996.7-201ENST00000492781 209 ntBASIC0.94□□□□□ -2.26
RFC3P40938 SNORA40.12-201ENST00000516329 111 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
RFC3P40938 CBX3P8-201ENST00000532412 525 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.94□□□□□ -2.26
RFC3P40938 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RFC3P40938 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.94□□□□□ -2.26
RFC3P40938 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.94□□□□□ -2.26
RFC3P40938 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.94□□□□□ -2.26
RFC3P40938 AC145350.1-201ENST00000567426 208 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
RFC3P40938 AL929325.1-201ENST00000603096 117 ntBASIC0.94□□□□□ -2.26
RFC3P40938 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AC021506.2-201ENST00000612354 169 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.94□□□□□ -2.26
RFC3P40938 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
RFC3P40938 AC008873.1-201ENST00000625051 138 ntBASIC0.94□□□□□ -2.26
RFC3P40938 RNU1-124P-201ENST00000363861 145 ntBASIC0.93□□□□□ -2.26
RFC3P40938 RNA5SP323-201ENST00000391094 133 ntBASIC0.93□□□□□ -2.26
RFC3P40938 RNA5SP467-201ENST00000391274 118 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AL356776.1-201ENST00000406574 447 ntBASIC0.93□□□□□ -2.26
RFC3P40938 MIR320B2-201ENST00000408479 138 ntBASIC0.93□□□□□ -2.26
RFC3P40938 RNU6-57P-201ENST00000411348 103 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.93□□□□□ -2.26
RFC3P40938 MTND2P9-201ENST00000422293 931 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AL606489.2-201ENST00000433886 234 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AL359672.1-201ENST00000442302 409 ntBASIC0.93□□□□□ -2.26
RFC3P40938 DYNLT3P2-201ENST00000442517 295 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.93□□□□□ -2.26
RFC3P40938 HMGB1P29-201ENST00000505659 499 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AL157687.1-201ENST00000554853 619 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.93□□□□□ -2.26
RFC3P40938 TPRKBP2-201ENST00000565969 475 ntBASIC0.93□□□□□ -2.26
RFC3P40938 MIR5692C1-201ENST00000585309 91 ntBASIC0.93□□□□□ -2.26
RFC3P40938 AC092747.3-201ENST00000603769 301 ntBASIC0.93□□□□□ -2.26
RFC3P40938 snoZ196.1-201ENST00000625269 89 ntBASIC0.93□□□□□ -2.26
RFC3P40938 OR5AK4P-201ENST00000635912 903 ntBASIC0.93□□□□□ -2.26
RFC3P40938 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RFC3P40938 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
RFC3P40938 RNU6-784P-201ENST00000384330 106 ntBASIC0.92□□□□□ -2.26
RFC3P40938 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
RFC3P40938 RNU6-1031P-201ENST00000384773 107 ntBASIC0.92□□□□□ -2.26
RFC3P40938 MIR222-201ENST00000384992 110 ntBASIC0.92□□□□□ -2.26
RFC3P40938 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
RFC3P40938 AC016909.1-201ENST00000415916 166 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AC008134.1-201ENST00000420943 193 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AL606517.2-201ENST00000442855 241 ntBASIC0.92□□□□□ -2.26
RFC3P40938 RPL39P38-201ENST00000467018 153 ntBASIC0.92□□□□□ -2.26
RFC3P40938 RNU6-344P-201ENST00000516635 111 ntBASIC0.92□□□□□ -2.26
RFC3P40938 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
RFC3P40938 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.92□□□□□ -2.26
RFC3P40938 CPDP1-201ENST00000579660 283 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AC073648.5-201ENST00000603502 305 ntBASIC0.92□□□□□ -2.26
RFC3P40938 BX284668.6-201ENST00000606899 438 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AL357078.3-201ENST00000607528 618 ntBASIC0.92□□□□□ -2.26
RFC3P40938 MIR8076-201ENST00000611401 83 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AC137590.2-201ENST00000619709 240 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AC068792.1-201ENST00000621354 417 ntBASIC0.92□□□□□ -2.26
RFC3P40938 AL078596.1-201ENST00000624856 447 ntBASIC0.92□□□□□ -2.26
RFC3P40938 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.92□□□□□ -2.26
RFC3P40938 SCARNA4-201ENST00000629045 128 ntBASIC0.92□□□□□ -2.26
RFC3P40938 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.92□□□□□ -2.26
RFC3P40938 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
RFC3P40938 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RFC3P40938 RNY3P9-201ENST00000384727 106 ntBASIC0.91□□□□□ -2.26
RFC3P40938 RNU6-325P-201ENST00000411132 105 ntBASIC0.91□□□□□ -2.26
RFC3P40938 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms