Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.26□□□□□ -2.21
RORAP35398 AL353149.1-201ENST00000610667 244 ntBASIC1.26□□□□□ -2.21
RORAP35398 AC073534.2-201ENST00000620377 381 ntBASIC1.26□□□□□ -2.21
RORAP35398 AL359697.1-201ENST00000624879 587 ntBASIC1.26□□□□□ -2.21
RORAP35398 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
RORAP35398 AC010615.1-201ENST00000594254 1764 ntBASIC1.26□□□□□ -2.21
RORAP35398 Y_RNA.41-201ENST00000362646 102 ntBASIC1.25□□□□□ -2.21
RORAP35398 SNORD50.1-201ENST00000362987 71 ntBASIC1.25□□□□□ -2.21
RORAP35398 RNU6-254P-201ENST00000363377 107 ntBASIC1.25□□□□□ -2.21
RORAP35398 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
RORAP35398 RNU6-483P-201ENST00000384088 108 ntBASIC1.25□□□□□ -2.21
RORAP35398 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
RORAP35398 Y_RNA.615-201ENST00000410769 117 ntBASIC1.25□□□□□ -2.21
RORAP35398 AL161935.2-201ENST00000414627 60 ntBASIC1.25□□□□□ -2.21
RORAP35398 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.25□□□□□ -2.21
RORAP35398 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.25□□□□□ -2.21
RORAP35398 SNRPEP10-201ENST00000420249 274 ntBASIC1.25□□□□□ -2.21
RORAP35398 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.25□□□□□ -2.21
RORAP35398 FTH1P12-201ENST00000432137 551 ntBASIC1.25□□□□□ -2.21
RORAP35398 ERLEC1P1-201ENST00000433806 578 ntBASIC1.25□□□□□ -2.21
RORAP35398 AL135790.2-201ENST00000437701 267 ntBASIC1.25□□□□□ -2.21
RORAP35398 JTBP1-201ENST00000441314 247 ntBASIC1.25□□□□□ -2.21
RORAP35398 OR2AQ1P-201ENST00000451972 200 ntBASIC1.25□□□□□ -2.21
RORAP35398 RNU7-66P-201ENST00000459469 62 ntBASIC1.25□□□□□ -2.21
RORAP35398 RPS26P55-201ENST00000471178 356 ntBASIC1.25□□□□□ -2.21
RORAP35398 MTCO1P29-201ENST00000496868 288 ntBASIC1.25□□□□□ -2.21
RORAP35398 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.25□□□□□ -2.21
RORAP35398 AC011406.1-201ENST00000512440 370 ntBASIC1.25□□□□□ -2.21
RORAP35398 RNU2-34P-201ENST00000516534 121 ntBASIC1.25□□□□□ -2.21
RORAP35398 AP003033.1-201ENST00000527244 415 ntBASIC1.25□□□□□ -2.21
RORAP35398 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.25□□□□□ -2.21
RORAP35398 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RORAP35398 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.25□□□□□ -2.21
RORAP35398 MIR5006-201ENST00000583027 110 ntBASIC1.25□□□□□ -2.21
RORAP35398 NBR2-204ENST00000587322 63 ntBASIC1.25□□□□□ -2.21
RORAP35398 AL133215.3-201ENST00000609801 448 ntBASIC1.25□□□□□ -2.21
RORAP35398 TCL6_2.1-201ENST00000615162 119 ntBASIC1.25□□□□□ -2.21
RORAP35398 MIR338-201ENST00000636369 67 ntBASIC1.25□□□□□ -2.21
RORAP35398 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.25□□□□□ -2.21
RORAP35398 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
RORAP35398 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
RORAP35398 ICE2P2-201ENST00000483823 2787 ntBASIC1.24□□□□□ -2.21
RORAP35398 SNORD33-201ENST00000362761 85 ntBASIC1.24□□□□□ -2.21
RORAP35398 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
RORAP35398 RNU6-214P-201ENST00000384130 107 ntBASIC1.24□□□□□ -2.21
RORAP35398 SNORA67.2-201ENST00000384300 149 ntBASIC1.24□□□□□ -2.21
RORAP35398 MIR521-1-201ENST00000384902 87 ntBASIC1.24□□□□□ -2.21
RORAP35398 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
RORAP35398 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RORAP35398 RNU6-360P-201ENST00000390944 104 ntBASIC1.24□□□□□ -2.21
RORAP35398 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
RORAP35398 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.24□□□□□ -2.21
RORAP35398 AC009237.7-201ENST00000447357 229 ntBASIC1.24□□□□□ -2.21
RORAP35398 AC079354.2-201ENST00000453523 154 ntBASIC1.24□□□□□ -2.21
RORAP35398 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.24□□□□□ -2.21
RORAP35398 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
RORAP35398 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
RORAP35398 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.24□□□□□ -2.21
RORAP35398 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
RORAP35398 AC146944.4-201ENST00000602697 718 ntBASIC1.24□□□□□ -2.21
RORAP35398 AP000907.4-201ENST00000604143 237 ntBASIC1.24□□□□□ -2.21
RORAP35398 SCARNA4-201ENST00000629045 128 ntBASIC1.24□□□□□ -2.21
RORAP35398 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
RORAP35398 AC100821.1-201ENST00000523153 2479 ntBASIC1.23□□□□□ -2.21
RORAP35398 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
RORAP35398 RNU6-451P-201ENST00000362921 107 ntBASIC1.23□□□□□ -2.21
RORAP35398 Y_RNA.256-201ENST00000364594 104 ntBASIC1.23□□□□□ -2.21
RORAP35398 RNU4-75P-201ENST00000364621 146 ntBASIC1.23□□□□□ -2.21
RORAP35398 RNU6-975P-201ENST00000384296 105 ntBASIC1.23□□□□□ -2.21
RORAP35398 RNA5SP504-201ENST00000410676 117 ntBASIC1.23□□□□□ -2.21
RORAP35398 SEPT14P3-201ENST00000439401 183 ntBASIC1.23□□□□□ -2.21
RORAP35398 AC069257.2-201ENST00000441819 155 ntBASIC1.23□□□□□ -2.21
RORAP35398 AL732372.2-207ENST00000445840 183 ntBASIC1.23□□□□□ -2.21
RORAP35398 NFU1P2-201ENST00000448700 469 ntBASIC1.23□□□□□ -2.21
RORAP35398 SEPT14P2-201ENST00000453405 183 ntBASIC1.23□□□□□ -2.21
RORAP35398 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
RORAP35398 HMGN2P26-201ENST00000463169 339 ntBASIC1.23□□□□□ -2.21
RORAP35398 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.23□□□□□ -2.21
RORAP35398 RPL23AP75-201ENST00000491601 451 ntBASIC1.23□□□□□ -2.21
RORAP35398 SEPT14P4-201ENST00000513445 186 ntBASIC1.23□□□□□ -2.21
RORAP35398 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.23□□□□□ -2.21
RORAP35398 RNU6-1281P-201ENST00000516223 105 ntBASIC1.23□□□□□ -2.21
RORAP35398 Y_RNA.673-201ENST00000516306 88 ntBASIC1.23□□□□□ -2.21
RORAP35398 RNA5SP481-201ENST00000516814 122 ntBASIC1.23□□□□□ -2.21
RORAP35398 FO082796.1-201ENST00000523795 183 ntBASIC1.23□□□□□ -2.21
RORAP35398 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
RORAP35398 AC103591.3-201ENST00000608684 209 ntBASIC1.23□□□□□ -2.21
RORAP35398 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.23□□□□□ -2.21
RORAP35398 Y_RNA.38-201ENST00000362617 102 ntBASIC1.22□□□□□ -2.21
RORAP35398 RNU6-1235P-201ENST00000384559 107 ntBASIC1.22□□□□□ -2.21
RORAP35398 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
RORAP35398 MIR1287-201ENST00000408492 90 ntBASIC1.22□□□□□ -2.21
RORAP35398 AC016909.1-201ENST00000415916 166 ntBASIC1.22□□□□□ -2.21
RORAP35398 AL590632.1-201ENST00000424289 371 ntBASIC1.22□□□□□ -2.21
RORAP35398 CST2P1-201ENST00000425770 87 ntBASIC1.22□□□□□ -2.21
RORAP35398 MTCO3P29-201ENST00000432119 779 ntBASIC1.22□□□□□ -2.21
RORAP35398 HMGN2P34-201ENST00000437647 269 ntBASIC1.22□□□□□ -2.21
RORAP35398 MTND1P11-201ENST00000456661 876 ntBASIC1.22□□□□□ -2.21
RORAP35398 RNU6-498P-201ENST00000459468 107 ntBASIC1.22□□□□□ -2.21
RORAP35398 AC114982.1-201ENST00000469402 321 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms