Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL590632.1-201ENST00000424289 371 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 RPL23AP95-201ENST00000426806 265 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 MTND3P9-201ENST00000429526 346 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A1P20908 AC004383.1-201ENST00000438135 289 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AL714022.1-201ENST00000439897 151 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.23□□□□□ -2.21
COL5A1P20908 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A1P20908 RPL30P12-201ENST00000474666 353 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AP001025.1-201ENST00000486139 332 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AC021146.2-201ENST00000504736 556 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 RNA5SP476-201ENST00000516613 103 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 RNA5SP384-201ENST00000516615 116 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 APOOP3-201ENST00000536787 586 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AC084364.2-201ENST00000546924 395 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AC021231.3-201ENST00000558497 370 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A1P20908 AC100830.2-201ENST00000581636 240 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 MIR1302-2-201ENST00000607096 138 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AL050343.2-201ENST00000607338 280 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A1P20908 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A1P20908 PISRT1.1-201ENST00000616930 107 ntBASIC1.23□□□□□ -2.21
COL5A1P20908 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.23□□□□□ -2.21
COL5A1P20908 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL5A1P20908 MIR369-201ENST00000362155 70 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-529P-201ENST00000363383 104 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-827P-201ENST00000365553 106 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 Y_RNA.533-201ENST00000384596 114 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MIR544A-201ENST00000384855 91 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL033519.2-201ENST00000403958 392 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RN7SKP51-201ENST00000410781 304 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-370P-201ENST00000411008 104 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.22□□□□□ -2.21
COL5A1P20908 snoU13.30-201ENST00000458951 104 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 Y_RNA.631-201ENST00000459607 101 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC112771.1-201ENST00000463581 102 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MTND5P5-201ENST00000503764 376 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 HMGB3P17-201ENST00000504195 649 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC096745.1-201ENST00000509945 370 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MRPS36P2-201ENST00000512569 299 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-1153P-201ENST00000516760 105 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC022616.4-201ENST00000522985 181 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AP003072.1-201ENST00000531740 145 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MIR6134-201ENST00000617606 109 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC073308.1-201ENST00000623696 305 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
COL5A1P20908 AL359854.1-201ENST00000614203 1594 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MTND4P27-201ENST00000450813 1354 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC068700.1-201ENST00000565862 3754 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 ICE2P2-201ENST00000483823 2787 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-270P-201ENST00000364131 105 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-99P-201ENST00000364721 107 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 Y_RNA.384-201ENST00000383909 102 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 Y_RNA.431-201ENST00000384086 102 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 Y_RNA.460-201ENST00000384255 102 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 Y_RNA.496-201ENST00000384444 101 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNA5SP465-201ENST00000391195 109 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.22□□□□□ -2.21
COL5A1P20908 RNA5SP390-201ENST00000410191 113 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC023141.4-201ENST00000412031 328 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL117339.3-201ENST00000418733 162 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL591043.1-201ENST00000432461 424 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.22□□□□□ -2.21
COL5A1P20908 AL137792.2-201ENST00000443484 235 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 ELOCP24-201ENST00000456370 334 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL441985.1-201ENST00000457727 251 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.22□□□□□ -2.21
COL5A1P20908 RNU7-23P-201ENST00000459465 62 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.22□□□□□ -2.21
COL5A1P20908 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.22□□□□□ -2.21
COL5A1P20908 RPL7P42-201ENST00000481005 679 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC005741.1-201ENST00000511094 432 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-470P-201ENST00000515954 104 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 ACA59.1-201ENST00000515966 143 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 RNU6-928P-201ENST00000516876 104 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 SNORA31.25-201ENST00000517242 134 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.22□□□□□ -2.21
COL5A1P20908 MIR5000-201ENST00000577717 103 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 MIR3609-201ENST00000582661 80 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL355598.1-201ENST00000604169 202 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL356157.2-201ENST00000605122 111 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AL080274.1-201ENST00000605565 220 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC006157.1-201ENST00000611750 366 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 AC084781.2-201ENST00000615568 161 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.22□□□□□ -2.21
COL5A1P20908 uc_338.22-201ENST00000622722 187 ntBASIC1.22□□□□□ -2.21
COL5A1P20908 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-1285P-201ENST00000363480 105 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-1210P-201ENST00000363775 107 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-1141P-201ENST00000364520 107 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-1303P-201ENST00000364841 107 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-596P-201ENST00000365395 98 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-203P-201ENST00000384038 104 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 Y_RNA.482-201ENST00000384377 111 ntBASIC1.21□□□□□ -2.22
COL5A1P20908 RNU6-1222P-201ENST00000384615 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms