Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC130P13994 OR2AQ1P-201ENST00000451972 200 ntBASIC1.32□□□□□ -2.2
CCDC130P13994 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC130P13994 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC130P13994 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC130P13994 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC130P13994 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
CCDC130P13994 MIR8076-201ENST00000611401 83 ntBASIC1.32□□□□□ -2.2
CCDC130P13994 MIR7111-201ENST00000619751 72 ntBASIC1.32□□□□□ -2.2
CCDC130P13994 AC121333.1-201ENST00000567488 2709 ntBASIC1.32□□□□□ -2.2
CCDC130P13994 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 RNU6-254P-201ENST00000363377 107 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 SNORD113-7-201ENST00000363762 77 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 Y_RNA.231-201ENST00000364358 102 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 SNORA25.9-201ENST00000365087 128 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 RNU6-975P-201ENST00000384296 105 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 MIR521-1-201ENST00000384902 87 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC130P13994 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC130P13994 AC019235.1-201ENST00000503847 207 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC130P13994 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC130P13994 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC130P13994 AC005668.1-201ENST00000571142 476 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 MIR4753-201ENST00000585119 83 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 AP003465.2-201ENST00000602571 373 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 AC092954.2-201ENST00000609103 430 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 AL353149.1-201ENST00000610667 244 ntBASIC1.31□□□□□ -2.2
CCDC130P13994 AC091812.1-201ENST00000432235 1948 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC130P13994 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC130P13994 SNORA4.2-201ENST00000365313 147 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 RNU6-214P-201ENST00000384130 107 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 Y_RNA.508-201ENST00000384502 114 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 MIR194-1-201ENST00000384892 85 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.3□□□□□ -2.2
CCDC130P13994 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC130P13994 AC009237.7-201ENST00000447357 229 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 MTND1P29-201ENST00000448112 647 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 NFU1P2-201ENST00000448700 469 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 RNU7-187P-201ENST00000458985 68 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC130P13994 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC130P13994 RPL23AP75-201ENST00000491601 451 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC130P13994 AC026470.2-201ENST00000561492 181 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 MIR4742-201ENST00000581069 85 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC130P13994 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC130P13994 AC004492.1-201ENST00000607036 742 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 AL133215.3-201ENST00000609801 448 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
CCDC130P13994 OR4G1P-203ENST00000641984 1631 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 SNORD50.1-201ENST00000362987 71 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 RNU6-53P-201ENST00000365367 106 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 RNU6-1235P-201ENST00000384559 107 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 SNRPEP10-201ENST00000420249 274 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 AC073910.1-201ENST00000445047 438 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC130P13994 RNU6-498P-201ENST00000459468 107 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC130P13994 MTCO1P29-201ENST00000496868 288 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 RNU6-948P-201ENST00000516374 107 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 RNU2-34P-201ENST00000516534 121 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 AL512360.1-201ENST00000555346 234 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 NBR2-204ENST00000587322 63 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 AC073413.2-201ENST00000604332 360 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC130P13994 SCARNA4-201ENST00000629045 128 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC130P13994 AC068137.3-201ENST00000639191 341 ntBASIC1.29□□□□□ -2.2
CCDC130P13994 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 Y_RNA.287-201ENST00000364853 94 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 RNU6-483P-201ENST00000384088 108 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 MRPL35P1-201ENST00000404272 572 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 RNU6-908P-201ENST00000410160 94 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 Y_RNA.615-201ENST00000410769 117 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 CST2P1-201ENST00000425770 87 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 ERLEC1P1-201ENST00000433806 578 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AC027119.1-201ENST00000440877 241 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AC107401.1-201ENST00000503426 685 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AC093852.1-201ENST00000503587 266 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 Y_RNA.704-201ENST00000516851 102 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 MTND1P35-201ENST00000526739 508 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AC026371.1-201ENST00000551867 419 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC130P13994 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 PIGPP4-201ENST00000584447 307 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AC010525.2-201ENST00000590920 195 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AC146944.4-201ENST00000602697 718 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 AL355802.3-201ENST00000607571 545 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 MIR8070-201ENST00000616510 88 ntBASIC1.28□□□□□ -2.2
CCDC130P13994 RNU6-1305P-201ENST00000364353 104 ntBASIC1.27□□□□□ -2.21
CCDC130P13994 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms