Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 RNY1P14-201ENST00000384426 108 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 MRPL42P3-201ENST00000401492 326 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC074290.1-201ENST00000448883 135 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 RNU7-21P-201ENST00000459430 62 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC016957.1-201ENST00000534895 309 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC090049.2-201ENST00000550377 109 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC004584.2-201ENST00000570407 410 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 MIR548AB-201ENST00000584917 84 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 BNIP3P39-201ENST00000601077 554 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AL353765.1-201ENST00000605514 183 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 RNU6-85P-201ENST00000605989 107 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC006566.1-201ENST00000608943 513 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC104465.1-201ENST00000611365 139 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 RMST_2.1-201ENST00000617263 136 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 AC008873.1-201ENST00000625051 138 ntBASIC0.46□□□□□ -2.34
HLA-DQB2P05538 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AL442644.1-201ENST00000454390 3105 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 Y_RNA.116-201ENST00000363292 103 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AL034345.1-201ENST00000407768 123 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 CDK8P2-201ENST00000415020 547 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.45□□□□□ -2.34
HLA-DQB2P05538 RNU7-167P-201ENST00000459160 62 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AC007215.1-201ENST00000464893 276 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 MTND2P14-201ENST00000482139 351 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 RNA5SP436-201ENST00000516020 115 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.45□□□□□ -2.34
HLA-DQB2P05538 MIR3682-201ENST00000581338 84 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 SNORA4-201ENST00000584302 138 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AP000907.4-201ENST00000604143 237 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AC139792.3-201ENST00000623525 224 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 snoZ196.1-201ENST00000625269 89 ntBASIC0.45□□□□□ -2.34
HLA-DQB2P05538 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HLA-DQB2P05538 AC106754.1-201ENST00000562632 1513 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC008134.1-201ENST00000420943 193 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AL035398.1-201ENST00000430869 322 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 RNU6-221P-201ENST00000459541 99 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC098869.1-201ENST00000481627 292 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 BET1P1-201ENST00000482276 359 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC010493.1-201ENST00000513479 292 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 RNA5SP220-201ENST00000516298 104 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 RNU6-612P-201ENST00000516909 102 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 MTND2P32-201ENST00000521584 1038 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC004223.4-201ENST00000612426 332 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC022709.1-201ENST00000615967 87 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 AC068792.1-201ENST00000621354 417 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
HLA-DQB2P05538 MTND4P5-201ENST00000435821 1374 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 MTND4P4-201ENST00000439033 1366 ntBASIC0.44□□□□□ -2.34
HLA-DQB2P05538 RNU6-227P-201ENST00000362865 103 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 RNU6-199P-201ENST00000362954 107 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 RNU6-1240P-201ENST00000365155 104 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 SNORD73A-201ENST00000386062 65 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 RNU6-1186P-201ENST00000410429 97 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQB2P05538 RPL31P35-201ENST00000431058 377 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQB2P05538 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQB2P05538 RNU6-1132P-201ENST00000459214 107 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 RNU6-917P-201ENST00000516294 104 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQB2P05538 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DQB2P05538 AL162424.1-201ENST00000602325 221 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 MIR98-201ENST00000606724 119 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 AL391834.2-201ENST00000609982 546 ntBASIC0.43□□□□□ -2.34
HLA-DQB2P05538 ELL2P3-201ENST00000457883 1602 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 Y_RNA.354-201ENST00000365448 111 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 RNU6-1286P-201ENST00000383871 107 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 SNORA75.2-201ENST00000391138 150 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 SNORA75.3-201ENST00000391231 150 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 RNA5SP494-201ENST00000410653 129 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.42□□□□□ -2.34
HLA-DQB2P05538 AL593851.1-201ENST00000426171 157 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.42□□□□□ -2.34
HLA-DQB2P05538 RPEP5-201ENST00000441137 268 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.42□□□□□ -2.34
HLA-DQB2P05538 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.42□□□□□ -2.34
HLA-DQB2P05538 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.42□□□□□ -2.34
HLA-DQB2P05538 AC105417.1-201ENST00000514691 285 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 MRPS36P3-201ENST00000519284 130 ntBASIC0.42□□□□□ -2.34
HLA-DQB2P05538 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.42□□□□□ -2.34
HLA-DQB2P05538 PRELID3BP2-201ENST00000605362 201 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms