Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC107401.1-201ENST00000503426 685 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 RNU6-948P-201ENST00000516374 107 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 RNA5SP481-201ENST00000516814 122 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.88□□□□□ -2.27
CPSF4O95639 MTND1P35-201ENST00000526739 508 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CPSF4O95639 AL512360.1-201ENST00000555346 234 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 AC146944.4-201ENST00000602697 718 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.88□□□□□ -2.27
CPSF4O95639 AC004492.1-201ENST00000607036 742 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.88□□□□□ -2.27
CPSF4O95639 AC005858.4-201ENST00000623191 700 ntBASIC0.88□□□□□ -2.27
CPSF4O95639 RNU6-254P-201ENST00000363377 107 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 SNORD113-7-201ENST00000363762 77 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU6-1305P-201ENST00000364353 104 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 Y_RNA.327-201ENST00000365201 102 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU6-933P-201ENST00000384424 107 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU6-1235P-201ENST00000384559 107 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU6-331P-201ENST00000384724 107 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 FGF7P8-201ENST00000402994 292 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.87□□□□□ -2.27
CPSF4O95639 MRPL35P3-201ENST00000421557 364 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.87□□□□□ -2.27
CPSF4O95639 FTH1P12-201ENST00000432137 551 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 ERLEC1P1-201ENST00000433806 578 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU7-187P-201ENST00000458985 68 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU6-498P-201ENST00000459468 107 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RPL23AP75-201ENST00000491601 451 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.87□□□□□ -2.27
CPSF4O95639 RNA5SP445-201ENST00000515889 115 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 Y_RNA.704-201ENST00000516851 102 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 RNU6-902P-201ENST00000517212 91 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 CBX3P8-201ENST00000532412 525 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AC026371.1-201ENST00000551867 419 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.87□□□□□ -2.27
CPSF4O95639 AC019288.1-201ENST00000557918 224 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AC010525.2-201ENST00000590920 195 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 MIR6715A-201ENST00000615929 79 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AC006001.4-201ENST00000622243 395 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AL359697.1-201ENST00000624879 587 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 SCARNA4-201ENST00000629045 128 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 AC068137.3-201ENST00000639191 341 ntBASIC0.87□□□□□ -2.27
CPSF4O95639 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CPSF4O95639 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
CPSF4O95639 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.87□□□□□ -2.27
CPSF4O95639 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.86□□□□□ -2.27
CPSF4O95639 snoU2-30.2-201ENST00000362805 70 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 SNORD50.1-201ENST00000362987 71 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 SNORA4.2-201ENST00000365313 147 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 Y_RNA.373-201ENST00000365600 103 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CPSF4O95639 Y_RNA.615-201ENST00000410769 117 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AL161935.2-201ENST00000414627 60 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.86□□□□□ -2.27
CPSF4O95639 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.86□□□□□ -2.27
CPSF4O95639 HMGN2P34-201ENST00000437647 269 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AL135790.2-201ENST00000437701 267 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AC073910.1-201ENST00000445047 438 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 MTND1P29-201ENST00000448112 647 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.86□□□□□ -2.27
CPSF4O95639 AC114982.1-201ENST00000469402 321 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AC019235.1-201ENST00000503847 207 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 RNU6-1281P-201ENST00000516223 105 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 MTND2P38-201ENST00000522536 667 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.86□□□□□ -2.27
CPSF4O95639 AC016957.1-201ENST00000534895 309 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.86□□□□□ -2.27
CPSF4O95639 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.86□□□□□ -2.27
CPSF4O95639 AP003465.2-201ENST00000602571 373 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 SNRPGP20-201ENST00000604477 205 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AC092954.2-201ENST00000609103 430 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AL133215.3-201ENST00000609801 448 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.86□□□□□ -2.27
CPSF4O95639 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.86□□□□□ -2.27
CPSF4O95639 ZNF204P-201ENST00000416749 2397 ntBASIC0.86□□□□□ -2.27
CPSF4O95639 MTND4P5-201ENST00000435821 1374 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 RNU6-1252P-201ENST00000363054 104 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 Y_RNA.151-201ENST00000363566 112 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 RNU6-483P-201ENST00000384088 108 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 SNORD116-2-201ENST00000384274 95 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 SNORA67.2-201ENST00000384300 149 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 SNORD116-6-201ENST00000384711 96 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 MIR586-201ENST00000385035 97 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 RNU6-908P-201ENST00000410160 94 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 RNU6-57P-201ENST00000411348 103 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF4O95639 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF4O95639 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF4O95639 RPS27P16-201ENST00000425758 201 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 TOMM22P2-201ENST00000430735 237 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 SEPT14P3-201ENST00000439401 183 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 AC027119.1-201ENST00000440877 241 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 AC069257.2-201ENST00000441819 155 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 AL732372.2-207ENST00000445840 183 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 SEPT14P2-201ENST00000453405 183 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.85□□□□□ -2.27
CPSF4O95639 snoU13.27-201ENST00000459278 104 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 RNU7-57P-201ENST00000459540 60 ntBASIC0.85□□□□□ -2.27
CPSF4O95639 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms