Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 Y_RNA.238-201ENST00000364441 102 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 Y_RNA.329-201ENST00000365209 107 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 RNU2-2P-201ENST00000410396 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 RNA5SP120-201ENST00000410900 112 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.1□□□□□ -1.91
CNOT4O95628 RPS29P31-201ENST00000446147 164 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 RPL36AP48-201ENST00000485521 314 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
CNOT4O95628 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CNOT4O95628 RNA5SP112-201ENST00000515937 99 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.1□□□□□ -1.91
CNOT4O95628 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.1□□□□□ -1.91
CNOT4O95628 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.1□□□□□ -1.91
CNOT4O95628 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.1□□□□□ -1.91
CNOT4O95628 AC009127.3-201ENST00000570531 403 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 AL034555.1-201ENST00000604816 211 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 RNU2-4P-201ENST00000606190 192 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.15-201ENST00000611544 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.16-201ENST00000613119 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.12-201ENST00000613778 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.9-201ENST00000615427 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.11-201ENST00000616345 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.2-201ENST00000616535 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.3-201ENST00000617785 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.19-201ENST00000618602 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 RNU2-1-201ENST00000618664 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.6-201ENST00000619225 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.5-201ENST00000619465 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 U2.10-201ENST00000620268 191 ntBASIC3.1□□□□□ -1.91
CNOT4O95628 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.1□□□□□ -1.91
CNOT4O95628 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CNOT4O95628 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.09□□□□□ -1.91
CNOT4O95628 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.09□□□□□ -1.91
CNOT4O95628 Y_RNA.23-201ENST00000362496 106 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 Y_RNA.121-201ENST00000363309 113 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 RNU6-312P-201ENST00000364629 107 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 Y_RNA.343-201ENST00000365354 112 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 RNU6-1264P-201ENST00000383891 107 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 RNU6-449P-201ENST00000383914 107 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 Y_RNA.412-201ENST00000384001 104 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 MIR128-1-201ENST00000384921 82 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 AL445687.1-201ENST00000439946 251 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 RNU2-12P-201ENST00000517216 168 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 MIR3199-1-201ENST00000582434 88 ntBASIC3.09□□□□□ -1.91
CNOT4O95628 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.09□□□□□ -1.92
CNOT4O95628 Y_RNA.75-201ENST00000362927 97 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 RNU1-33P-201ENST00000364249 162 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 Y_RNA.415-201ENST00000384012 112 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 MIR184-201ENST00000384962 84 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 MIR218-1-201ENST00000384999 110 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 AL133475.1-201ENST00000404414 305 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
CNOT4O95628 RPS27AP9-201ENST00000477681 438 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 FCF1P8-201ENST00000510322 597 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.08□□□□□ -1.92
CNOT4O95628 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.08□□□□□ -1.92
CNOT4O95628 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.08□□□□□ -1.92
CNOT4O95628 RPS15AP11-201ENST00000594193 385 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 RNU6-91P-201ENST00000607774 107 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 MIR7157-201ENST00000635801 60 ntBASIC3.08□□□□□ -1.92
CNOT4O95628 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNOT4O95628 AC068647.1-201ENST00000489539 2265 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CNOT4O95628 Y_RNA.182-201ENST00000363880 111 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 RNU6-324P-201ENST00000363957 106 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 Y_RNA.400-201ENST00000383963 111 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 Y_RNA.488-201ENST00000384403 102 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 Y_RNA.497-201ENST00000384447 98 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AL357075.1-201ENST00000404107 726 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 U3.40-201ENST00000408706 208 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 RNU2-51P-201ENST00000410708 197 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 RNA5SP492-201ENST00000411330 114 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CNOT4O95628 AC005326.1-201ENST00000429197 123 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AC115115.1-201ENST00000449927 248 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AC006539.3-201ENST00000454258 129 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 Y_RNA.637-201ENST00000459424 114 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 RPL23AP67-201ENST00000465341 474 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AC005840.1-201ENST00000498412 377 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.07□□□□□ -1.92
CNOT4O95628 AC023141.11-201ENST00000508864 202 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 RNU6-436P-201ENST00000516171 114 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 RNU6-107P-201ENST00000516643 102 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 MIR4738-201ENST00000579134 87 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 MIR4425-201ENST00000580572 84 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 AC090616.3-201ENST00000582184 217 ntBASIC3.07□□□□□ -1.92
CNOT4O95628 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNOT4O95628 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNOT4O95628 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CNOT4O95628 RNU6-486P-201ENST00000363116 107 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 RNU4-84P-201ENST00000364200 139 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 SNORD50B-201ENST00000364995 70 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms