Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.25□□□□□ -2.21
CLDN9O95484 AC146944.4-201ENST00000602697 718 ntBASIC1.25□□□□□ -2.21
CLDN9O95484 PRR13P7-201ENST00000605538 430 ntBASIC1.25□□□□□ -2.21
CLDN9O95484 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
CLDN9O95484 AC006001.4-201ENST00000622243 395 ntBASIC1.25□□□□□ -2.21
CLDN9O95484 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
CLDN9O95484 OR5AK4P-201ENST00000635912 903 ntBASIC1.25□□□□□ -2.21
CLDN9O95484 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
CLDN9O95484 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLDN9O95484 AP000568.1-201ENST00000282964 442 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 SNORA33-201ENST00000363664 130 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 Y_RNA.178-201ENST00000363832 102 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 RNU6-1305P-201ENST00000364353 104 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 RNU6-975P-201ENST00000384296 105 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 RNU6-1119P-201ENST00000384349 108 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 MIR598-201ENST00000384868 97 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 COX6CP10-201ENST00000416832 224 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.24□□□□□ -2.21
CLDN9O95484 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 MTATP6P17-201ENST00000431030 672 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN9O95484 MTND3P16-201ENST00000452205 344 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 HMGN1P7-201ENST00000491722 313 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 MTCO1P29-201ENST00000496868 288 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 AC091885.1-201ENST00000506658 268 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN9O95484 AC026407.1-201ENST00000518369 204 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 MTND1P15-201ENST00000579262 949 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 AC068792.1-201ENST00000621354 417 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 MIR6863-201ENST00000636112 90 ntBASIC1.24□□□□□ -2.21
CLDN9O95484 MTND4P5-201ENST00000435821 1374 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 snoU2-30.2-201ENST00000362805 70 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 SNORA4.2-201ENST00000365313 147 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 RNU6-1042P-201ENST00000384204 107 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 EIF4E2P1-201ENST00000393781 255 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.23□□□□□ -2.21
CLDN9O95484 HMGN2P34-201ENST00000437647 269 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 AC074290.1-201ENST00000448883 135 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN9O95484 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLDN9O95484 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.23□□□□□ -2.21
CLDN9O95484 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.23□□□□□ -2.21
CLDN9O95484 AC008269.2-201ENST00000561915 1105 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 AC015688.6-201ENST00000577737 104 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.23□□□□□ -2.21
CLDN9O95484 MIR8076-201ENST00000611401 83 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 AC022709.1-201ENST00000615967 87 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 AL158209.2-201ENST00000619266 216 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 AC097520.1-201ENST00000624435 385 ntBASIC1.23□□□□□ -2.21
CLDN9O95484 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLDN9O95484 SNORD33-201ENST00000362761 85 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 RNU6-1085P-201ENST00000363576 107 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 SNORA72.2-201ENST00000365028 127 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 Y_RNA.481-201ENST00000384373 102 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AL161935.2-201ENST00000414627 60 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 POLR2J4-204ENST00000418424 324 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 USP9YP14-201ENST00000430663 563 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 RNU7-34P-201ENST00000459394 64 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 RNU6-835P-201ENST00000516974 104 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 MTND1P35-201ENST00000526739 508 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AC016957.1-201ENST00000534895 309 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.22□□□□□ -2.21
CLDN9O95484 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.22□□□□□ -2.21
CLDN9O95484 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
CLDN9O95484 MIR4709-201ENST00000577272 72 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AC136443.5-201ENST00000603741 370 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 SNRPGP20-201ENST00000604477 205 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 AL078604.3-201ENST00000615580 211 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 PVT1_3.1-201ENST00000620853 95 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 SCARNA4-201ENST00000629045 128 ntBASIC1.22□□□□□ -2.21
CLDN9O95484 Y_RNA.167-201ENST00000363735 109 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 Y_RNA.205-201ENST00000364128 113 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 SNORD114-22-201ENST00000365423 72 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 MIR487A-201ENST00000385009 80 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 MIR514A2-201ENST00000385131 88 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 MIR514A3-201ENST00000385132 88 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CLDN9O95484 MIR450B-201ENST00000401182 78 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 MIR1253-201ENST00000408273 105 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 MIR320B2-201ENST00000408479 138 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 RNU6-648P-201ENST00000410190 107 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 AC007215.1-201ENST00000464893 276 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.21□□□□□ -2.22
CLDN9O95484 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.21□□□□□ -2.22
CLDN9O95484 RNU6-1146P-201ENST00000516282 102 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.21□□□□□ -2.22
CLDN9O95484 AL158211.1-201ENST00000566763 763 ntBASIC1.21□□□□□ -2.22
CLDN9O95484 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms