Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
TRIM3O75382 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
TRIM3O75382 RNU6-112P-201ENST00000363599 104 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 Y_RNA.157-201ENST00000363638 102 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 U8.10-201ENST00000384260 133 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 AC060773.1-201ENST00000421698 310 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 UBE2V1P8-201ENST00000437166 265 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.47□□□□□ -2.17
TRIM3O75382 snoU13.30-201ENST00000458951 104 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 AC067942.3-201ENST00000512025 362 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM3O75382 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM3O75382 BX322639.1-202ENST00000423987 2213 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.47□□□□□ -2.17
TRIM3O75382 MTND4P5-201ENST00000435821 1374 ntBASIC1.47□□□□□ -2.17
TRIM3O75382 Y_RNA.6-201ENST00000362350 114 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 Y_RNA.67-201ENST00000362870 100 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU6-457P-201ENST00000363999 107 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU1-96P-201ENST00000364163 162 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU4-9P-201ENST00000364951 139 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRIM3O75382 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM3O75382 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.46□□□□□ -2.18
TRIM3O75382 MTATP6P13-201ENST00000438531 667 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 MTND1P34-201ENST00000438556 671 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 MTND4LP16-201ENST00000440828 295 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM3O75382 HMGN2P9-201ENST00000476875 229 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM3O75382 AC011352.1-201ENST00000512300 793 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU4-49P-201ENST00000516080 140 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNA5SP384-201ENST00000516615 116 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU6-856P-201ENST00000516959 98 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU1-117P-201ENST00000517041 158 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNA5SP454-201ENST00000517231 127 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM3O75382 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.46□□□□□ -2.18
TRIM3O75382 AP000942.3-201ENST00000603702 160 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 uc_338.5-201ENST00000611839 155 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 AC093913.1-201ENST00000614178 329 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 AC126177.8-201ENST00000618339 1015 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 AC068205.3-201ENST00000636385 468 ntBASIC1.46□□□□□ -2.18
TRIM3O75382 RNU6-1059P-201ENST00000363752 98 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 RNU6-975P-201ENST00000384296 105 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 RNU6-296P-201ENST00000384608 107 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 MIR320B2-201ENST00000408479 138 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 RNA5SP118-201ENST00000410385 109 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.45□□□□□ -2.18
TRIM3O75382 RPL30P10-201ENST00000488148 337 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 AC011406.1-201ENST00000512440 370 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 RNU6-948P-201ENST00000516374 107 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.45□□□□□ -2.18
TRIM3O75382 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.45□□□□□ -2.18
TRIM3O75382 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.45□□□□□ -2.18
TRIM3O75382 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM3O75382 AC139792.2-201ENST00000624218 587 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.45□□□□□ -2.18
TRIM3O75382 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
TRIM3O75382 AC027514.1-201ENST00000588561 1603 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 WWP1P1-201ENST00000466609 2769 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 Y_RNA.86-201ENST00000363020 111 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 RNU6-1013P-201ENST00000384180 107 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 Y_RNA.533-201ENST00000384596 114 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AL117342.1-201ENST00000404861 406 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 RPL30P16-201ENST00000419341 429 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.44□□□□□ -2.18
TRIM3O75382 AC108667.1-201ENST00000428618 249 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AL603825.1-201ENST00000438481 80 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM3O75382 AC112492.4-201ENST00000456549 352 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 snoU13.9-201ENST00000458927 103 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 RNU6-566P-201ENST00000516790 107 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 RNU6-58P-201ENST00000517143 103 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 MIR4273-201ENST00000582824 84 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.44□□□□□ -2.18
TRIM3O75382 AC068790.6-201ENST00000602558 258 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AP003465.2-201ENST00000602571 373 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AC069114.2-201ENST00000604699 304 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 MIR6128-201ENST00000615528 109 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AC006001.4-201ENST00000622243 395 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 AL359697.1-201ENST00000624879 587 ntBASIC1.44□□□□□ -2.18
TRIM3O75382 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRIM3O75382 Y_RNA.48-201ENST00000362710 103 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 Y_RNA.301-201ENST00000364990 103 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 Y_RNA.319-201ENST00000365138 92 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 RNU2-7P-201ENST00000410794 178 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 USP9YP30-201ENST00000430729 455 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 AC245047.4-201ENST00000433189 144 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 RNU7-57P-201ENST00000459540 60 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 AC025465.3-201ENST00000510570 311 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 RNA5SP458-201ENST00000516188 119 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 SNORA25.14-201ENST00000516481 132 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 RNA5SP54-201ENST00000516951 92 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 RNU1-54P-201ENST00000517181 120 ntBASIC1.43□□□□□ -2.18
TRIM3O75382 RNA5SP437-201ENST00000517249 129 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms