Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTND4LP32-201ENST00000636111 270 ntBASIC1.83□□□□□ -2.12
SNX3O60493 AL136360.1-201ENST00000503377 1900 ntBASIC1.83□□□□□ -2.12
SNX3O60493 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNX3O60493 MTND5P16-201ENST00000460269 1703 ntBASIC1.83□□□□□ -2.12
SNX3O60493 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.82□□□□□ -2.12
SNX3O60493 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
SNX3O60493 RNU6-727P-201ENST00000363592 107 ntBASIC1.82□□□□□ -2.12
SNX3O60493 RNU6-280P-201ENST00000364145 104 ntBASIC1.82□□□□□ -2.12
SNX3O60493 Y_RNA.387-201ENST00000383918 102 ntBASIC1.82□□□□□ -2.12
SNX3O60493 RNU6-975P-201ENST00000384296 105 ntBASIC1.82□□□□□ -2.12
SNX3O60493 Y_RNA.529-201ENST00000384586 119 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
SNX3O60493 MTCYBP10-201ENST00000424905 650 ntBASIC1.82□□□□□ -2.12
SNX3O60493 MTATP6P23-201ENST00000440153 476 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AC093019.1-201ENST00000443135 252 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AL357134.1-201ENST00000445848 426 ntBASIC1.82□□□□□ -2.12
SNX3O60493 MTCO3P10-201ENST00000455912 772 ntBASIC1.82□□□□□ -2.12
SNX3O60493 RPL30P15-201ENST00000457129 321 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.82□□□□□ -2.12
SNX3O60493 AC091179.3-201ENST00000474761 144 ntBASIC1.82□□□□□ -2.12
SNX3O60493 RPL17P19-201ENST00000489069 552 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.82□□□□□ -2.12
SNX3O60493 AC067942.3-201ENST00000512025 362 ntBASIC1.82□□□□□ -2.12
SNX3O60493 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
SNX3O60493 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.82□□□□□ -2.12
SNX3O60493 AL355375.2-201ENST00000574825 175 ntBASIC1.82□□□□□ -2.12
SNX3O60493 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
SNX3O60493 SNORD11B-201ENST00000607707 90 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AC025253.1-201ENST00000613623 543 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AL162373.1-201ENST00000620433 407 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AC008873.1-201ENST00000625051 138 ntBASIC1.82□□□□□ -2.12
SNX3O60493 AL159152.1-201ENST00000635019 2587 ntBASIC1.82□□□□□ -2.12
SNX3O60493 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SNX3O60493 RNU6-99P-201ENST00000364721 107 ntBASIC1.81□□□□□ -2.12
SNX3O60493 SNORD87-201ENST00000364849 89 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNU6-890P-201ENST00000384121 107 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNU6-281P-201ENST00000384212 103 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNU6-1297P-201ENST00000384415 104 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNA5SP213-201ENST00000391031 106 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNU1-139P-201ENST00000391307 165 ntBASIC1.81□□□□□ -2.12
SNX3O60493 SNORA75.6-201ENST00000391318 127 ntBASIC1.81□□□□□ -2.12
SNX3O60493 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
SNX3O60493 AC092423.1-201ENST00000430165 186 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNU7-87P-201ENST00000459343 62 ntBASIC1.81□□□□□ -2.12
SNX3O60493 FGF7P4-201ENST00000509595 295 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNU6-1114P-201ENST00000516022 107 ntBASIC1.81□□□□□ -2.12
SNX3O60493 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
SNX3O60493 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX3O60493 AC004584.2-201ENST00000570407 410 ntBASIC1.81□□□□□ -2.12
SNX3O60493 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX3O60493 AC013412.1-201ENST00000610687 192 ntBASIC1.81□□□□□ -2.12
SNX3O60493 MIR1244-1-201ENST00000612829 85 ntBASIC1.81□□□□□ -2.12
SNX3O60493 AC083806.3-201ENST00000614016 455 ntBASIC1.81□□□□□ -2.12
SNX3O60493 AC005296.1-201ENST00000616145 209 ntBASIC1.81□□□□□ -2.12
SNX3O60493 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX3O60493 AL078596.1-201ENST00000624856 447 ntBASIC1.81□□□□□ -2.12
SNX3O60493 MIR1244-3-201ENST00000635744 85 ntBASIC1.81□□□□□ -2.12
SNX3O60493 MIR1244-2-201ENST00000636449 85 ntBASIC1.81□□□□□ -2.12
SNX3O60493 MIR1244-4-202ENST00000636813 85 ntBASIC1.81□□□□□ -2.12
SNX3O60493 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SNX3O60493 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SNX3O60493 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SNX3O60493 Y_RNA.70-201ENST00000362886 110 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.179-201ENST00000363844 90 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.263-201ENST00000364659 114 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.356-201ENST00000365475 113 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.364-201ENST00000365532 101 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.384-201ENST00000383909 102 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.415-201ENST00000384012 112 ntBASIC1.8□□□□□ -2.12
SNX3O60493 RNU6-793P-201ENST00000384233 104 ntBASIC1.8□□□□□ -2.12
SNX3O60493 SNORD116-29-201ENST00000384516 83 ntBASIC1.8□□□□□ -2.12
SNX3O60493 AL353689.1-201ENST00000438895 199 ntBASIC1.8□□□□□ -2.12
SNX3O60493 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX3O60493 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
SNX3O60493 Y_RNA.653-201ENST00000459091 95 ntBASIC1.8□□□□□ -2.12
SNX3O60493 AC114982.1-201ENST00000469402 321 ntBASIC1.8□□□□□ -2.12
SNX3O60493 AC022493.2-201ENST00000506122 481 ntBASIC1.8□□□□□ -2.12
SNX3O60493 RNU6-948P-201ENST00000516374 107 ntBASIC1.8□□□□□ -2.12
SNX3O60493 RNU6-856P-201ENST00000516959 98 ntBASIC1.8□□□□□ -2.12
SNX3O60493 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX3O60493 AP002770.2-201ENST00000543613 532 ntBASIC1.8□□□□□ -2.12
SNX3O60493 AC005786.1-201ENST00000588553 154 ntBASIC1.8□□□□□ -2.12
SNX3O60493 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SNX3O60493 MZT1P2-201ENST00000604387 248 ntBASIC1.8□□□□□ -2.12
SNX3O60493 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
SNX3O60493 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNX3O60493 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
SNX3O60493 RNU6-1235P-201ENST00000384559 107 ntBASIC1.79□□□□□ -2.12
SNX3O60493 Y_RNA.557-201ENST00000384680 107 ntBASIC1.79□□□□□ -2.12
SNX3O60493 SNORA48.1-201ENST00000390879 135 ntBASIC1.79□□□□□ -2.12
SNX3O60493 RNU2-2P-201ENST00000410396 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AL158823.1-201ENST00000418441 478 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AC007098.1-201ENST00000420122 367 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AC060773.1-201ENST00000421698 310 ntBASIC1.79□□□□□ -2.12
SNX3O60493 MTND4LP11-201ENST00000422184 280 ntBASIC1.79□□□□□ -2.12
SNX3O60493 EIF1P2-201ENST00000428233 350 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.79□□□□□ -2.12
SNX3O60493 U8.22-201ENST00000459141 133 ntBASIC1.79□□□□□ -2.12
SNX3O60493 RNU6-498P-201ENST00000459468 107 ntBASIC1.79□□□□□ -2.12
SNX3O60493 RNU7-57P-201ENST00000459540 60 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms