Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC068792.1-201ENST00000621354 417 ntBASIC1.66□□□□□ -2.14
CUX2O14529 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CUX2O14529 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
CUX2O14529 RNU6-1329P-201ENST00000365664 107 ntBASIC1.65□□□□□ -2.15
CUX2O14529 SNORA36A-201ENST00000384221 132 ntBASIC1.65□□□□□ -2.15
CUX2O14529 RNU6-1026P-201ENST00000384465 108 ntBASIC1.65□□□□□ -2.15
CUX2O14529 RNU2-66P-201ENST00000410650 161 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AC139712.2-201ENST00000424302 339 ntBASIC1.65□□□□□ -2.15
CUX2O14529 USP9YP14-201ENST00000430663 563 ntBASIC1.65□□□□□ -2.15
CUX2O14529 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.65□□□□□ -2.15
CUX2O14529 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.65□□□□□ -2.15
CUX2O14529 TPT1P7-201ENST00000458300 517 ntBASIC1.65□□□□□ -2.15
CUX2O14529 RNU1-131P-201ENST00000458943 161 ntBASIC1.65□□□□□ -2.15
CUX2O14529 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.65□□□□□ -2.15
CUX2O14529 RPL39P5-202ENST00000512505 151 ntBASIC1.65□□□□□ -2.15
CUX2O14529 RNVU1-2-201ENST00000516326 135 ntBASIC1.65□□□□□ -2.15
CUX2O14529 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
CUX2O14529 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AC025423.5-201ENST00000550230 219 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AL157687.1-201ENST00000554853 619 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AL512360.1-201ENST00000555346 234 ntBASIC1.65□□□□□ -2.15
CUX2O14529 MIR3169-201ENST00000578032 83 ntBASIC1.65□□□□□ -2.15
CUX2O14529 PIGPP4-201ENST00000584447 307 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AC005786.1-201ENST00000588553 154 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.65□□□□□ -2.15
CUX2O14529 AC005520.5-201ENST00000613926 164 ntBASIC1.65□□□□□ -2.15
CUX2O14529 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
CUX2O14529 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.65□□□□□ -2.15
CUX2O14529 RNU6-1317P-201ENST00000364582 104 ntBASIC1.64□□□□□ -2.15
CUX2O14529 SNORA26.3-201ENST00000391119 136 ntBASIC1.64□□□□□ -2.15
CUX2O14529 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CUX2O14529 MIR450B-201ENST00000401182 78 ntBASIC1.64□□□□□ -2.15
CUX2O14529 VN1R36P-201ENST00000414936 291 ntBASIC1.64□□□□□ -2.15
CUX2O14529 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.64□□□□□ -2.15
CUX2O14529 MTND3P9-201ENST00000429526 346 ntBASIC1.64□□□□□ -2.15
CUX2O14529 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.64□□□□□ -2.15
CUX2O14529 AC021146.2-201ENST00000504736 556 ntBASIC1.64□□□□□ -2.15
CUX2O14529 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
CUX2O14529 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.64□□□□□ -2.15
CUX2O14529 AC104576.1-201ENST00000524225 88 ntBASIC1.64□□□□□ -2.15
CUX2O14529 MIR5692C1-201ENST00000585309 91 ntBASIC1.64□□□□□ -2.15
CUX2O14529 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
CUX2O14529 AC126177.8-201ENST00000618339 1015 ntBASIC1.64□□□□□ -2.15
CUX2O14529 SNORD31B-201ENST00000364977 69 ntBASIC1.63□□□□□ -2.15
CUX2O14529 Y_RNA.373-201ENST00000365600 103 ntBASIC1.63□□□□□ -2.15
CUX2O14529 MIR150-201ENST00000385048 84 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.63□□□□□ -2.15
CUX2O14529 MTCO3P46-201ENST00000425787 232 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.63□□□□□ -2.15
CUX2O14529 Y_RNA.654-201ENST00000497848 106 ntBASIC1.63□□□□□ -2.15
CUX2O14529 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CUX2O14529 AC026371.1-201ENST00000551867 419 ntBASIC1.63□□□□□ -2.15
CUX2O14529 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AC008163.1-202ENST00000636004 2889 ntBASIC1.63□□□□□ -2.15
CUX2O14529 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
CUX2O14529 MIR513A1-201ENST00000385138 129 ntBASIC1.63□□□□□ -2.15
CUX2O14529 SNORA48.1-201ENST00000390879 135 ntBASIC1.63□□□□□ -2.15
CUX2O14529 EIF4E2P1-201ENST00000393781 255 ntBASIC1.63□□□□□ -2.15
CUX2O14529 RNA5SP494-201ENST00000410653 129 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AC009310.1-201ENST00000414414 451 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.63□□□□□ -2.15
CUX2O14529 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.63□□□□□ -2.15
CUX2O14529 SNORD60.2-201ENST00000516883 86 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.63□□□□□ -2.15
CUX2O14529 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.63□□□□□ -2.15
CUX2O14529 AC104458.1-201ENST00000608243 463 ntBASIC1.63□□□□□ -2.15
CUX2O14529 AC092807.2-201ENST00000609367 243 ntBASIC1.63□□□□□ -2.15
CUX2O14529 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.62□□□□□ -2.15
CUX2O14529 AL159152.1-201ENST00000635019 2587 ntBASIC1.62□□□□□ -2.15
CUX2O14529 SNORA32.2-201ENST00000384049 122 ntBASIC1.62□□□□□ -2.15
CUX2O14529 SNORA29-201ENST00000384183 140 ntBASIC1.62□□□□□ -2.15
CUX2O14529 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
CUX2O14529 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CUX2O14529 AL359672.1-201ENST00000442302 409 ntBASIC1.62□□□□□ -2.15
CUX2O14529 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
CUX2O14529 AC007547.1-201ENST00000462177 490 ntBASIC1.62□□□□□ -2.15
CUX2O14529 AC130509.1-201ENST00000464158 433 ntBASIC1.62□□□□□ -2.15
CUX2O14529 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.62□□□□□ -2.15
CUX2O14529 AC097473.1-201ENST00000508142 408 ntBASIC1.62□□□□□ -2.15
CUX2O14529 SNORA19.2-201ENST00000516013 114 ntBASIC1.62□□□□□ -2.15
CUX2O14529 RNU6-1332P-201ENST00000516666 104 ntBASIC1.62□□□□□ -2.15
CUX2O14529 AC016256.1-201ENST00000547971 354 ntBASIC1.62□□□□□ -2.15
CUX2O14529 AL118558.2-201ENST00000556294 238 ntBASIC1.62□□□□□ -2.15
CUX2O14529 FGF7P1-201ENST00000582820 288 ntBASIC1.62□□□□□ -2.15
CUX2O14529 SNORA43.4-201ENST00000629559 138 ntBASIC1.62□□□□□ -2.15
CUX2O14529 RNU6-545P-201ENST00000362681 104 ntBASIC1.61□□□□□ -2.15
CUX2O14529 RNA5SP331-201ENST00000364986 107 ntBASIC1.61□□□□□ -2.15
CUX2O14529 Y_RNA.412-201ENST00000384001 104 ntBASIC1.61□□□□□ -2.15
CUX2O14529 RNU6-933P-201ENST00000384424 107 ntBASIC1.61□□□□□ -2.15
CUX2O14529 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
CUX2O14529 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
CUX2O14529 MRPS10P2-201ENST00000431226 381 ntBASIC1.61□□□□□ -2.15
CUX2O14529 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.61□□□□□ -2.15
CUX2O14529 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
CUX2O14529 HMGN1P13-201ENST00000505795 138 ntBASIC1.61□□□□□ -2.15
CUX2O14529 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CUX2O14529 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
CUX2O14529 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.61□□□□□ -2.15
CUX2O14529 AC022254.1-201ENST00000567857 235 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms