Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.14□□□□□ -2.23
CDC7O00311 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.14□□□□□ -2.23
CDC7O00311 AC006001.4-201ENST00000622243 395 ntBASIC1.14□□□□□ -2.23
CDC7O00311 AL359697.1-201ENST00000624879 587 ntBASIC1.14□□□□□ -2.23
CDC7O00311 RNU6-53P-201ENST00000365367 106 ntBASIC1.13□□□□□ -2.23
CDC7O00311 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
CDC7O00311 MIR487A-201ENST00000385009 80 ntBASIC1.13□□□□□ -2.23
CDC7O00311 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CDC7O00311 DEFB108C-201ENST00000400154 252 ntBASIC1.13□□□□□ -2.23
CDC7O00311 MIR450B-201ENST00000401182 78 ntBASIC1.13□□□□□ -2.23
CDC7O00311 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.13□□□□□ -2.23
CDC7O00311 USP9YP14-201ENST00000430663 563 ntBASIC1.13□□□□□ -2.23
CDC7O00311 MTCO2P16-201ENST00000436962 677 ntBASIC1.13□□□□□ -2.23
CDC7O00311 AC114982.1-201ENST00000469402 321 ntBASIC1.13□□□□□ -2.23
CDC7O00311 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.13□□□□□ -2.23
CDC7O00311 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.13□□□□□ -2.23
CDC7O00311 AC146944.4-201ENST00000602697 718 ntBASIC1.13□□□□□ -2.23
CDC7O00311 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.13□□□□□ -2.23
CDC7O00311 AC068792.1-201ENST00000621354 417 ntBASIC1.13□□□□□ -2.23
CDC7O00311 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
CDC7O00311 OR4G1P-203ENST00000641984 1631 ntBASIC1.12□□□□□ -2.23
CDC7O00311 RNU6-1322P-201ENST00000364309 107 ntBASIC1.12□□□□□ -2.23
CDC7O00311 RNU6-534P-201ENST00000364877 106 ntBASIC1.12□□□□□ -2.23
CDC7O00311 SNORA72.2-201ENST00000365028 127 ntBASIC1.12□□□□□ -2.23
CDC7O00311 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
CDC7O00311 MIR521-1-201ENST00000384902 87 ntBASIC1.12□□□□□ -2.23
CDC7O00311 MIR514A2-201ENST00000385131 88 ntBASIC1.12□□□□□ -2.23
CDC7O00311 MIR514A3-201ENST00000385132 88 ntBASIC1.12□□□□□ -2.23
CDC7O00311 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
CDC7O00311 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.12□□□□□ -2.23
CDC7O00311 MTND3P16-201ENST00000452205 344 ntBASIC1.12□□□□□ -2.23
CDC7O00311 AC007215.1-201ENST00000464893 276 ntBASIC1.12□□□□□ -2.23
CDC7O00311 RNU6-1332P-201ENST00000516666 104 ntBASIC1.12□□□□□ -2.23
CDC7O00311 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CDC7O00311 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.12□□□□□ -2.23
CDC7O00311 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.12□□□□□ -2.23
CDC7O00311 AC136443.5-201ENST00000603741 370 ntBASIC1.12□□□□□ -2.23
CDC7O00311 FAM157A-202ENST00000615155 405 ntBASIC1.12□□□□□ -2.23
CDC7O00311 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.12□□□□□ -2.23
CDC7O00311 SCARNA4-201ENST00000629045 128 ntBASIC1.12□□□□□ -2.23
CDC7O00311 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CDC7O00311 MTND4P5-201ENST00000435821 1374 ntBASIC1.11□□□□□ -2.23
CDC7O00311 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.11□□□□□ -2.23
CDC7O00311 SNORD33-201ENST00000362761 85 ntBASIC1.11□□□□□ -2.23
CDC7O00311 RNU6-1305P-201ENST00000364353 104 ntBASIC1.11□□□□□ -2.23
CDC7O00311 RNU6-1119P-201ENST00000384349 108 ntBASIC1.11□□□□□ -2.23
CDC7O00311 MIR586-201ENST00000385035 97 ntBASIC1.11□□□□□ -2.23
CDC7O00311 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
CDC7O00311 RNU6-648P-201ENST00000410190 107 ntBASIC1.11□□□□□ -2.23
CDC7O00311 COX6CP10-201ENST00000416832 224 ntBASIC1.11□□□□□ -2.23
CDC7O00311 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC7O00311 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC7O00311 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC7O00311 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
CDC7O00311 MTCO1P29-201ENST00000496868 288 ntBASIC1.11□□□□□ -2.23
CDC7O00311 RNU6-835P-201ENST00000516974 104 ntBASIC1.11□□□□□ -2.23
CDC7O00311 AC011604.1-201ENST00000545978 196 ntBASIC1.11□□□□□ -2.23
CDC7O00311 MIR4709-201ENST00000577272 72 ntBASIC1.11□□□□□ -2.23
CDC7O00311 CPDP1-201ENST00000579660 283 ntBASIC1.11□□□□□ -2.23
CDC7O00311 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.11□□□□□ -2.23
CDC7O00311 RN7SKP299-201ENST00000606679 301 ntBASIC1.11□□□□□ -2.23
CDC7O00311 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
CDC7O00311 MIR8076-201ENST00000611401 83 ntBASIC1.11□□□□□ -2.23
CDC7O00311 Y_RNA.287-201ENST00000364853 94 ntBASIC1.1□□□□□ -2.23
CDC7O00311 RNU6-214P-201ENST00000384130 107 ntBASIC1.1□□□□□ -2.23
CDC7O00311 RNU6-784P-201ENST00000384330 106 ntBASIC1.1□□□□□ -2.23
CDC7O00311 RNU6-417P-201ENST00000384712 107 ntBASIC1.1□□□□□ -2.23
CDC7O00311 EIF4E2P1-201ENST00000393781 255 ntBASIC1.1□□□□□ -2.23
CDC7O00311 RNU6-57P-201ENST00000411348 103 ntBASIC1.1□□□□□ -2.23
CDC7O00311 EIF1P1-201ENST00000421436 341 ntBASIC1.1□□□□□ -2.23
CDC7O00311 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC7O00311 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC7O00311 RNU7-34P-201ENST00000459394 64 ntBASIC1.1□□□□□ -2.23
CDC7O00311 AC091885.1-201ENST00000506658 268 ntBASIC1.1□□□□□ -2.23
CDC7O00311 MTND1P35-201ENST00000526739 508 ntBASIC1.1□□□□□ -2.23
CDC7O00311 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC7O00311 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC7O00311 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC7O00311 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
CDC7O00311 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC7O00311 MTND1P15-201ENST00000579262 949 ntBASIC1.1□□□□□ -2.23
CDC7O00311 MIR4742-201ENST00000581069 85 ntBASIC1.1□□□□□ -2.23
CDC7O00311 MIR3611-201ENST00000584484 83 ntBASIC1.1□□□□□ -2.23
CDC7O00311 SNRPGP20-201ENST00000604477 205 ntBASIC1.1□□□□□ -2.23
CDC7O00311 RMST_2.1-201ENST00000617263 136 ntBASIC1.1□□□□□ -2.23
CDC7O00311 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC7O00311 AC097520.1-201ENST00000624435 385 ntBASIC1.1□□□□□ -2.23
CDC7O00311 MIR6863-201ENST00000636112 90 ntBASIC1.1□□□□□ -2.23
CDC7O00311 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
CDC7O00311 RNU6-522P-201ENST00000364497 107 ntBASIC1.09□□□□□ -2.23
CDC7O00311 RNU6-933P-201ENST00000384424 107 ntBASIC1.09□□□□□ -2.23
CDC7O00311 AC016909.1-201ENST00000415916 166 ntBASIC1.09□□□□□ -2.23
CDC7O00311 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
CDC7O00311 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC7O00311 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.09□□□□□ -2.23
CDC7O00311 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
CDC7O00311 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
CDC7O00311 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC7O00311 AC008873.1-201ENST00000625051 138 ntBASIC1.09□□□□□ -2.23
CDC7O00311 ZNF204P-201ENST00000416749 2397 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms